GNL2

General Information

Gene Name : GNL2
Gene ID : ENSG00000134697.12
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: GNL2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	GNL2	ENSG00000134697.12	87.04	98.87	92.96	ENCSR000AEF
HepG2	GNL2	ENSG00000134697.12	61.44	70.54	65.99	ENCSR985KAT
K562	GNL2	ENSG00000134697.12	183.14	214.12	198.63	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for GNL2 is not avaliable on ENCORE database.

Proteins bound to RNA

GNL2 RNA is bound by 24 proteins.

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eCLIP assay for GNL2 is not avaliable on ENCORE database.

24 proteins are bound to GNL2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	38034735	38034829	-	CDS,intron-Distal	3.66767	23.13223	K562	UCHL5
chr1	38033767	38033884	-	CDS,intron-Distal,intron-Proximal	4.30110	19.18050	K562	AQR
chr1	38032545	38032609	-	CDS,intron-Distal	3.65733	18.76078	K562	UCHL5
chr1	38061359	38061514	-	5'-UTR,CDS,intron-Distal	3.57340	17.33388	K562	DDX3X
chr1	38033901	38033943	-	CDS,intron-Distal	4.38828	17.13945	K562	UCHL5
chr1	38033310	38033357	-	CDS,intron-Distal	4.00071	17.09641	K562	UCHL5
chr1	38033277	38033310	-	CDS,intron-Distal	4.32920	16.89929	K562	UCHL5
chr1	38034829	38034897	-	CDS,intron-Distal	3.14690	15.17014	K562	UCHL5
chr1	38034533	38034625	-	CDS,intron-Distal	4.36636	14.65767	K562	UCHL5
chr1	38034453	38034564	-	CDS,intron-Distal	3.12883	14.55779	K562	ZNF622
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 86 entries

eCLIP assay for GNL2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for GNL2 is not available on ENCORE database.
79 RBPs can affect the levels of GNL2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for GNL2 is not available on ENCORE database.

79 RBPs can affect the gene expression of GNL2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
GNL2	ENSG00000134697.8	9242.52640	6101.16870	0.59910	21.27740	19.63220	K562	DDX47
GNL2	ENSG00000134697.8	3419.22400	5286.01560	-0.62850	17.79970	16.20820	K562	EIF2S2
GNL2	ENSG00000134697.8	6163.65850	3739.01350	0.72100	17.89890	15.80070	K562	U2AF2
GNL2	ENSG00000134697.8	3999.11760	5368.59990	-0.42490	11.32900	9.99790	K562	UPF1
GNL2	ENSG00000134697.8	1688.00560	957.98080	0.81720	11.13410	9.85080	HepG2	U2AF1
GNL2	ENSG00000134697.8	944.71350	1425.67740	-0.59370	10.75070	9.45760	HepG2	HNRNPF
GNL2	ENSG00000134697.8	5715.07830	3883.53590	0.55730	11.10720	9.32750	K562	SF3B4
GNL2	ENSG00000134697.8	877.88130	1403.89110	-0.67730	10.24110	8.93260	HepG2	IGF2BP1
GNL2	ENSG00000134697.8	1512.01640	1054.02900	0.52050	9.29760	8.54490	HepG2	SRSF1
GNL2	ENSG00000134697.8	4717.69870	3359.23640	0.48980	9.95320	8.43820	K562	EIF3G
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 94 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for GNL2 is not available on ENCORE database.

7 RBPs can affect the splicing of GNL2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	GNL2	ENSG00000134697.8	chr1	-	38046942	38047146			38042028	38042157	38047823	38047937	0.44800	0.00000	0.00000	included	HepG2	HNRNPK
SE	GNL2	ENSG00000134697.8	chr1	-	38046942	38047146			38042028	38042157	38047823	38047937	0.29500	0.00000	0.00000	included	HepG2	MATR3
SE	GNL2	ENSG00000134697.8	chr1	-	38046942	38047146			38042028	38042157	38047823	38047937	0.06800	0.00000	0.00000	included	K562	HNRNPK
A3SS	GNL2	ENSG00000134697.8	chr1	-	38032416	38032654			38032416	38032608	38033273	38033716	0.08900	0.00000	0.00000	longer	K562	AQR
A3SS	GNL2	ENSG00000134697.8	chr1	-	38033273	38033412			38033273	38033365	38033875	38034042	0.08200	0.00000	0.00000	longer	K562	AQR
A3SS	GNL2	ENSG00000134697.8	chr1	-	38040265	38040500			38040265	38040424	38041195	38041300	0.14100	0.00000	0.00000	longer	K562	AQR
MXE	GNL2	ENSG00000134697.8	chr1	-	38042028	38042157	38046942	38047146	38041195	38041300	38047823	38047937	0.18100	0.00000	0.00000	1included	HepG2	HNRNPK
SE	GNL2	ENSG00000134697.8	chr1	-	38046942	38047146			38042028	38042157	38047823	38047937	0.05500	0.00002	0.00822	included	K562	UPF1
SE	GNL2	ENSG00000134697.8	chr1	-	38046942	38047146			38042028	38042157	38047823	38047937	0.05300	0.00003	0.01291	included	K562	SERBP1
SE	GNL2	ENSG00000134697.8	chr1	-	38046942	38047146			38042039	38042157	38047823	38047937	0.09200	0.00008	0.01862	included	K562	HNRNPM

Showing 1 to 10 of 11 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

GNL2

General Information

Functions

Localization

Domains (AlphaFold: GNL2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for GNL2 is not avaliable on ENCORE database.

24 proteins are bound to GNL2 RNA:

eCLIP assay for GNL2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for GNL2 is not available on ENCORE database.

79 RBPs can affect the gene expression of GNL2 :

The Knockdown/knockout RNA-Seq assay for GNL2 is not available on ENCORE database.

7 RBPs can affect the splicing of GNL2 :

The Knockdown/knockout RNA-Seq assay for GNL2 is not avaliable on ENCORE database.