FCGRT

General Information

Gene Name : FCGRT
Gene ID : ENSG00000104870.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: FCGRT)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	FCGRT	ENSG00000104870.12	0.00	0.13	0.07	ENCSR000AEF
HepG2	FCGRT	ENSG00000104870.12	132.73	90.90	111.81	ENCSR985KAT
K562	FCGRT	ENSG00000104870.12	1.02	1.07	1.04	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for FCGRT is not avaliable on ENCORE database.

Proteins bound to RNA

FCGRT RNA is bound by 29 proteins.

CanvasJS.com

eCLIP assay for FCGRT is not avaliable on ENCORE database.

29 proteins are bound to FCGRT RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	50016642	50016706	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	5.26500	400.00000	HepG2	DDX3X
chr19	50016538	50016620	+	5'-UTR,intron-Distal,intron-Proximal	4.94214	400.00000	HepG2	DDX3X
chr19	50017156	50017207	+	3'-UTR,CDS,intron-Distal	4.33304	79.59237	HepG2	DDX3X
chr19	50016706	50016730	+	CDS,intron-Distal	4.71455	71.10296	HepG2	DDX3X
chr19	50016620	50016642	+	5'-UTR,intron-Distal,intron-Proximal	4.81538	53.59875	HepG2	DDX3X
chr19	50017207	50017238	+	3'-UTR,CDS,intron-Distal	4.53968	51.67111	HepG2	DDX3X
chr19	50017250	50017315	+	3'-UTR,CDS,intron-Distal	3.36699	33.04786	HepG2	DDX3X
chr19	50016370	50016446	+	5'-UTR,intron-Distal	5.15144	26.19392	HepG2	FAM120A
chr19	50029405	50029469	+	3'-UTR	3.64883	25.56141	HepG2	LARP4
chr19	50029502	50029561	+	3'-UTR	3.61460	25.07009	HepG2	LARP4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 98 entries

eCLIP assay for FCGRT is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for FCGRT is not available on ENCORE database.
87 RBPs can affect the levels of FCGRT.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for FCGRT is not available on ENCORE database.

87 RBPs can affect the gene expression of FCGRT :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
FCGRT	ENSG00000104870.8	941.90930	3257.89460	-1.79030	111.29220	109.27940	HepG2	SRFBP1
FCGRT	ENSG00000104870.8	1526.37010	3924.96290	-1.36260	85.24240	83.46010	HepG2	SRSF1
FCGRT	ENSG00000104870.8	1301.87420	3193.12760	-1.29440	72.83310	70.79170	HepG2	SRSF9
FCGRT	ENSG00000104870.8	3120.81170	1747.93240	0.83620	37.98060	36.01820	HepG2	SLBP
FCGRT	ENSG00000104870.8	2268.96470	4019.53690	-0.82500	31.82050	30.41080	HepG2	NELFE
FCGRT	ENSG00000104870.8	2039.35790	3611.70930	-0.82460	30.65850	29.23010	HepG2	PTBP1
FCGRT	ENSG00000104870.8	3873.64100	1822.94760	1.08730	29.33890	27.67280	HepG2	PUF60
FCGRT	ENSG00000104870.8	2139.91570	3549.52150	-0.73010	25.25730	23.73400	HepG2	PCBP1
FCGRT	ENSG00000104870.8	968.76550	1933.72770	-0.99720	24.32780	22.46140	HepG2	PUM2
FCGRT	ENSG00000104870.8	1431.30660	2305.03770	-0.68750	20.97450	19.65050	HepG2	ACO1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 96 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for FCGRT is not available on ENCORE database.

28 RBPs can affect the splicing of FCGRT :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	FCGRT	ENSG00000104870.8	chr19	+	50024951	50025070			50017138	50017743	50027763	50028033	-0.07400	0.00049	excluded	HepG2	NOL12
RI	FCGRT	ENSG00000104870.8	chr19	+	50027763	50028830			50027763	50028033	50028713	50028830	0.40900	0.00000	included	HepG2	U2AF2
RI	FCGRT	ENSG00000104870.8	chr19	+	50027763	50028830			50027763	50028033	50028713	50028830	0.18400	0.00006	included	HepG2	XRCC6
RI	FCGRT	ENSG00000104870.8	chr19	+	50027763	50028830			50027763	50028033	50028713	50028830	0.09000	0.00005	included	HepG2	QKI
RI	FCGRT	ENSG00000104870.8	chr19	+	50027763	50028830			50027763	50028033	50028713	50028830	-0.14800	0.00009	excluded	HepG2	NKRF
RI	FCGRT	ENSG00000104870.8	chr19	+	50027763	50028830			50027763	50028033	50028713	50028830	0.19700	0.00000	included	HepG2	HNRNPC
RI	FCGRT	ENSG00000104870.8	chr19	+	50027763	50028830			50027763	50028033	50028713	50028830	0.12700	0.00000	included	HepG2	SF3B4
RI	FCGRT	ENSG00000104870.8	chr19	+	50027763	50028830			50027763	50028033	50028713	50028830	0.33600	0.00000	included	HepG2	FUBP3
RI	FCGRT	ENSG00000104870.8	chr19	+	50027763	50028830			50027763	50028033	50028713	50028830	-0.15000	0.00006	excluded	HepG2	SUGP2
MXE	FCGRT	ENSG00000104870.8	chr19	+	50027763	50028033	50028713	50028830	50017467	50017743	50029266	50029590	-0.13500	0.00027	2included	HepG2	SRSF1

Showing 1 to 10 of 38 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

FCGRT

General Information

Functions

Localization

Domains (AlphaFold: FCGRT)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for FCGRT is not avaliable on ENCORE database.

29 proteins are bound to FCGRT RNA:

eCLIP assay for FCGRT is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for FCGRT is not available on ENCORE database.

87 RBPs can affect the gene expression of FCGRT :

The Knockdown/knockout RNA-Seq assay for FCGRT is not available on ENCORE database.

28 RBPs can affect the splicing of FCGRT :

The Knockdown/knockout RNA-Seq assay for FCGRT is not avaliable on ENCORE database.