CDK2

General Information

Gene Name : CDK2
Gene ID : ENSG00000123374.10
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CDK2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CDK2	ENSG00000123374.10	68.19	63.18	65.69	ENCSR000AEF
HepG2	CDK2	ENSG00000123374.10	43.71	56.05	49.88	ENCSR985KAT
K562	CDK2	ENSG00000123374.10	119.58	86.98	103.28	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CDK2 is not avaliable on ENCORE database.

Proteins bound to RNA

CDK2 RNA is bound by 19 proteins.

CanvasJS.com

eCLIP assay for CDK2 is not avaliable on ENCORE database.

19 proteins are bound to CDK2 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	56360911	56360950	+	5'-UTR,intron-Proximal	6.94164	89.33328	K562	AQR
chr12	56365993	56366122	+	3'-UTR	5.72062	75.66408	K562	UPF1
chr12	56361606	56361645	+	5'-UTR,CDS,intron-Distal,intron-Proximal	6.97140	75.23552	K562	AQR
chr12	56365911	56365959	+	3'-UTR	6.07374	64.81506	K562	FAM120A
chr12	56366001	56366079	+	3'-UTR	5.12737	59.16224	K562	FAM120A
chr12	56360907	56360911	+	5'-UTR,CDS,intron-Proximal	6.32868	58.64166	K562	AQR
chr12	56365898	56365993	+	3'-UTR	4.71620	54.55997	K562	UPF1
chr12	56365739	56365806	+	3'-UTR	5.68929	52.44583	K562	FAM120A
chr12	56365959	56365995	+	3'-UTR	5.59188	46.88210	K562	FAM120A
chr12	56365806	56365898	+	3'-UTR	5.55187	44.79694	K562	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 59 entries

eCLIP assay for CDK2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CDK2 is not available on ENCORE database.
128 RBPs can affect the levels of CDK2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CDK2 is not available on ENCORE database.

128 RBPs can affect the gene expression of CDK2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CDK2	ENSG00000123374.6	254.51430	828.16900	-1.70220	53.77850	52.15550	HepG2	ZNF622
CDK2	ENSG00000123374.6	189.89170	847.02020	-2.15720	39.96730	37.99580	HepG2	SUPV3L1
CDK2	ENSG00000123374.6	276.65420	846.30600	-1.61310	37.04670	35.60180	HepG2	TIAL1
CDK2	ENSG00000123374.6	263.41360	716.76000	-1.44420	36.21810	34.43620	HepG2	CKAP4
CDK2	ENSG00000123374.6	1640.89140	3158.04370	-0.94460	33.32110	30.90090	K562	SF3A3
CDK2	ENSG00000123374.6	274.35300	856.46240	-1.64240	32.36990	30.61160	HepG2	RPLP0
CDK2	ENSG00000123374.6	488.66520	1119.40510	-1.19580	30.49800	28.84000	HepG2	CELF1
CDK2	ENSG00000123374.6	198.34240	656.27820	-1.72630	25.98630	23.90930	HepG2	PRPF8
CDK2	ENSG00000123374.6	230.42220	687.41150	-1.57690	24.64970	22.90590	HepG2	TARDBP
CDK2	ENSG00000123374.6	490.94130	1139.37200	-1.21460	23.74000	22.22670	HepG2	PUF60
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 159 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CDK2 is not available on ENCORE database.

17 RBPs can affect the splicing of CDK2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CDK2	ENSG00000123374.6	chr12	+	56363258	56363360	56362561	56362732	56364827	56365031	-0.25800	0.00000	0.00000	excluded	K562	PRPF8
RI	CDK2	ENSG00000123374.6	chr12	+	56360614	56361718	56360614	56360908	56361640	56361718	0.14500	0.00000	0.00002	included	K562	AQR
SE	CDK2	ENSG00000123374.6	chr12	+	56363258	56363360	56362561	56362732	56364827	56365031	-0.14600	0.00001	0.00041	excluded	K562	HNRNPC
SE	CDK2	ENSG00000123374.6	chr12	+	56363258	56363360	56362561	56362732	56364827	56365031	-0.24700	0.00002	0.00171	excluded	HepG2	PCBP1
RI	CDK2	ENSG00000123374.6	chr12	+	56360614	56361718	56360614	56360908	56361640	56361718	-0.12800	0.00002	0.00400	excluded	K562	NONO
SE	CDK2	ENSG00000123374.6	chr12	+	56363258	56363360	56362561	56362732	56364827	56365031	-0.11700	0.00003	0.00363	excluded	K562	EFTUD2
RI	CDK2	ENSG00000123374.6	chr12	+	56360614	56361718	56360614	56360908	56361640	56361718	0.19600	0.00013	0.00955	included	HepG2	XRN2
SE	CDK2	ENSG00000123374.6	chr12	+	56363258	56363360	56362561	56362732	56364827	56365031	-0.11100	0.00019	0.00522	excluded	K562	SF3B4
RI	CDK2	ENSG00000123374.6	chr12	+	56360614	56361718	56360614	56360908	56361640	56361718	0.32500	0.00046	0.01298	included	HepG2	IGF2BP3
RI	CDK2	ENSG00000123374.6	chr12	+	56360614	56361718	56360614	56360908	56361640	56361718	0.17000	0.00069	0.01836	included	HepG2	KHSRP

Showing 1 to 10 of 22 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CDK2

General Information

Functions

Localization

Domains (AlphaFold: CDK2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CDK2 is not avaliable on ENCORE database.

19 proteins are bound to CDK2 RNA:

eCLIP assay for CDK2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CDK2 is not available on ENCORE database.

128 RBPs can affect the gene expression of CDK2 :

The Knockdown/knockout RNA-Seq assay for CDK2 is not available on ENCORE database.

17 RBPs can affect the splicing of CDK2 :

The Knockdown/knockout RNA-Seq assay for CDK2 is not avaliable on ENCORE database.