ZNF616

General Information

Gene Name : ZNF616
Gene ID : ENSG00000204611.6
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ZNF616)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ZNF616	ENSG00000204611.6	3.87	2.90	3.38	ENCSR000AEF
HepG2	ZNF616	ENSG00000204611.6	4.29	7.32	5.80	ENCSR985KAT
K562	ZNF616	ENSG00000204611.6	8.08	6.19	7.13	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary

RNA Targets

eCLIP assay for ZNF616 is not avaliable on ENCORE database.

Proteins bound to RNA

NO known proteins bind on ZNF616 RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for ZNF616 is not avaliable on ENCORE database.

NO known proteins are bound to ZNF616 RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for ZNF616 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ZNF616 is not available on ENCORE database.
64 RBPs can affect the levels of ZNF616.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ZNF616 is not available on ENCORE database.

64 RBPs can affect the gene expression of ZNF616 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ZNF616	ENSG00000204611.2	1061.32740	396.75040	1.41950	36.60240	35.13840	HepG2	RBM22
ZNF616	ENSG00000204611.2	2049.27130	702.97640	1.54350	36.45730	34.53500	K562	AQR
ZNF616	ENSG00000204611.2	716.55230	287.00570	1.31990	24.38200	22.00360	K562	U2AF2
ZNF616	ENSG00000204611.2	714.05770	249.86270	1.51480	21.35850	19.55080	HepG2	U2AF1
ZNF616	ENSG00000204611.2	620.85690	266.66140	1.21920	16.74740	14.59660	K562	EIF4A3
ZNF616	ENSG00000204611.2	1567.45220	936.08290	0.74360	10.64200	9.02850	K562	PUF60
ZNF616	ENSG00000204611.2	188.07170	395.46200	-1.07230	10.28570	8.93540	K562	SRSF1
ZNF616	ENSG00000204611.2	684.70960	340.61220	1.00730	8.99810	8.10020	HepG2	AKAP1
ZNF616	ENSG00000204611.2	537.01590	319.64470	0.74840	8.66850	7.65140	HepG2	CELF1
ZNF616	ENSG00000204611.2	125.32050	262.80750	-1.06840	8.25180	7.47160	HepG2	TIAL1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 70 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ZNF616 is not available on ENCORE database.

9 RBPs can affect the splicing of ZNF616 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ZNF616	ENSG00000204611.2	chr19	-	52642707	52642879	52633753	52633841	52642984	52642999	0.52400	0.00000	0.00000	included	K562	AKAP8L
SE	ZNF616	ENSG00000204611.2	chr19	-	52642707	52642879	52633753	52633841	52642984	52642999	0.61000	0.00000	0.00000	included	K562	PUS1
SE	ZNF616	ENSG00000204611.2	chr19	-	52642707	52642879	52633753	52633841	52642984	52642999	0.66800	0.00000	0.00001	included	K562	RBM15
SE	ZNF616	ENSG00000204611.2	chr19	-	52642707	52642879	52633753	52633841	52642984	52642999	0.55100	0.00000	0.00019	included	K562	AGGF1
SE	ZNF616	ENSG00000204611.2	chr19	-	52625612	52625710	52618042	52620277	52627175	52627302	0.47500	0.00001	0.01277	included	K562	KHSRP
SE	ZNF616	ENSG00000204611.2	chr19	-	52642707	52642879	52633753	52633841	52642984	52642999	0.52800	0.00002	0.00176	included	K562	UTP18
SE	ZNF616	ENSG00000204611.2	chr19	-	52625612	52625710	52618042	52620277	52627175	52627302	0.36800	0.00357	0.05332	included	K562	HNRNPC
SE	ZNF616	ENSG00000204611.2	chr19	-	52625612	52625710	52618042	52620277	52627175	52627284	-0.12700	0.00405	0.03912	excluded	K562	AQR
SE	ZNF616	ENSG00000204611.2	chr19	-	52625612	52625710	52618042	52620277	52627175	52627302	-0.15100	0.00619	0.08500	excluded	K562	U2AF2

Showing 1 to 9 of 9 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ZNF616

General Information

Functions

Localization

Domains (AlphaFold: ZNF616)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ZNF616 is not avaliable on ENCORE database.

NO known proteins are bound to ZNF616 RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for ZNF616 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ZNF616 is not available on ENCORE database.

64 RBPs can affect the gene expression of ZNF616 :

The Knockdown/knockout RNA-Seq assay for ZNF616 is not available on ENCORE database.

9 RBPs can affect the splicing of ZNF616 :

The Knockdown/knockout RNA-Seq assay for ZNF616 is not avaliable on ENCORE database.