ZNF616

General Information

Gene Name       : ZNF616
Gene ID             : ENSG00000204611.6
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF616)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF616ENSG00000204611.63.872.903.38ENCSR000AEF
HepG2ZNF616ENSG00000204611.64.297.325.80ENCSR985KAT
K562ZNF616ENSG00000204611.68.086.197.13ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF616 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on ZNF616 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for ZNF616 is not avaliable on ENCORE database.






NO known proteins are bound to ZNF616 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for ZNF616 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF616 is not available on ENCORE database.

  • 64 RBPs can affect the levels of ZNF616.  








The Knockdown/knockout RNA-Seq assay for ZNF616 is not available on ENCORE database.





64 RBPs can affect the gene expression of ZNF616 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF616ENSG00000204611.2684.70960340.612201.007308.998108.10020HepG2AKAP1
ZNF616ENSG00000204611.2504.29220363.668100.471502.652401.63580HepG2AKAP8
ZNF616ENSG00000204611.2541.12830413.451400.388202.944702.23960HepG2AUH
ZNF616ENSG00000204611.2537.01590319.644700.748408.668507.65140HepG2CELF1
ZNF616ENSG00000204611.2364.47380256.953600.504202.655101.89460HepG2DDX55
ZNF616ENSG00000204611.2220.97970370.47080-0.745403.229002.17500HepG2DDX59
ZNF616ENSG00000204611.2168.10930240.29120-0.515402.897502.23220HepG2DNAJC2
ZNF616ENSG00000204611.2533.76170292.111300.869605.816604.74140HepG2FIP1L1
ZNF616ENSG00000204611.2431.80410290.086700.573802.766201.65130HepG2FUS
ZNF616ENSG00000204611.2240.77070369.82860-0.619203.229902.54300HepG2GPKOW
ZNF616ENSG00000204611.2224.15660352.93360-0.654903.613902.90440HepG2HNRNPLL
ZNF616ENSG00000204611.2307.62760201.522700.610103.414802.36770HepG2HNRNPM
ZNF616ENSG00000204611.2371.49340236.381500.652104.003603.03480HepG2MSI2
ZNF616ENSG00000204611.2337.80840232.992600.535803.620402.74670HepG2PRPF4
ZNF616ENSG00000204611.2363.72920269.575500.432102.424701.90690HepG2PTBP1
ZNF616ENSG00000204611.2402.44990291.961000.462902.751102.12780HepG2QKI
ZNF616ENSG00000204611.2463.97790265.074700.807603.912503.07870HepG2RAVER1
ZNF616ENSG00000204611.21061.32740396.750401.4195036.6024035.13840HepG2RBM22
ZNF616ENSG00000204611.2175.57960264.97180-0.593703.057402.35230HepG2RBM25
ZNF616ENSG00000204611.2298.18030196.209100.603703.114502.28730HepG2RRP9
ZNF616ENSG00000204611.2357.08000280.877200.346202.007801.44580HepG2SMN1
ZNF616ENSG00000204611.2638.09940388.699300.715004.123903.16050HepG2SNRNP70
ZNF616ENSG00000204611.2604.83470448.120200.432603.876203.31330HepG2SRFBP1
ZNF616ENSG00000204611.2508.64870389.083600.386501.909401.46290HepG2SSB
ZNF616ENSG00000204611.2125.32050262.80750-1.068408.251807.47160HepG2TIAL1
ZNF616ENSG00000204611.2714.05770249.862701.5148021.3585019.55080HepG2U2AF1
ZNF616ENSG00000204611.2561.67190336.429100.739304.897003.76100HepG2UBE2L3
ZNF616ENSG00000204611.2383.28950249.990900.616503.907402.47700K562AARS
ZNF616ENSG00000204611.2985.68310734.089800.425103.163501.84050K562ABCF1
ZNF616ENSG00000204611.2205.97850434.69420-1.077506.457105.64270K562AGGF1
ZNF616ENSG00000204611.2172.98540251.95120-0.542503.213301.56700K562AKAP1
ZNF616ENSG00000204611.2326.92910477.58740-0.546803.202202.12780K562AKAP8
ZNF616ENSG00000204611.2270.19210452.30040-0.743304.219203.40990K562AKAP8L
ZNF616ENSG00000204611.22049.27130702.976401.5435036.4573034.53500K562AQR
ZNF616ENSG00000204611.2616.81160418.413300.559803.963302.91710K562BOP1
ZNF616ENSG00000204611.2510.45880360.903700.500102.592001.35580K562EEF2
ZNF616ENSG00000204611.2620.85690266.661401.2192016.7474014.59660K562EIF4A3
ZNF616ENSG00000204611.2458.40420277.313500.725006.708905.82590K562FXR1
ZNF616ENSG00000204611.2213.17680377.72310-0.825306.779304.41830K562G3BP1
ZNF616ENSG00000204611.2472.65530286.685500.721204.485203.54030K562G3BP2
ZNF616ENSG00000204611.2244.84680439.56600-0.844203.595002.14070K562HNRNPA2B1
ZNF616ENSG00000204611.2360.68090273.563500.398701.923401.41430K562HNRNPC
ZNF616ENSG00000204611.2223.00460394.99400-0.824805.423903.78230K562IGF2BP2
ZNF616ENSG00000204611.2245.37400480.06910-0.968303.275102.36970K562KIF1C
ZNF616ENSG00000204611.2528.62390362.701600.543402.833601.88660K562KRR1
ZNF616ENSG00000204611.2605.54720415.222000.544304.742903.63610K562MAGOH
ZNF616ENSG00000204611.2560.37440414.394600.435303.187202.19180K562MATR3
ZNF616ENSG00000204611.2360.27820537.78950-0.577902.322901.50190K562MBNL1
ZNF616ENSG00000204611.2235.73080376.94570-0.677203.510902.49010K562NAA15
ZNF616ENSG00000204611.2179.60910384.56070-1.098405.087603.63210K562PABPN1
ZNF616ENSG00000204611.2644.92760472.371400.449102.619901.81310K562PCBP3
ZNF616ENSG00000204611.2483.19980362.332400.415202.711701.91960K562POLR2G
ZNF616ENSG00000204611.2231.88830457.26360-0.979604.283002.32780K562PPP1R8
ZNF616ENSG00000204611.2492.82610339.319300.538303.233202.42200K562PRPF8
ZNF616ENSG00000204611.2300.60380403.40680-0.424402.599501.95250K562PTBP1
ZNF616ENSG00000204611.21567.45220936.082900.7436010.642009.02850K562PUF60
ZNF616ENSG00000204611.2190.35840448.69120-1.237007.442306.59770K562PUS1
ZNF616ENSG00000204611.2214.49830437.07150-1.026906.787605.88480K562RBM15
ZNF616ENSG00000204611.2293.63080386.87290-0.397902.086301.36170K562RBM22
ZNF616ENSG00000204611.2313.87290223.768400.488102.548901.60130K562RCC2
ZNF616ENSG00000204611.2461.40330333.772400.467102.824401.36600K562SDAD1
ZNF616ENSG00000204611.2160.86590351.72790-1.128604.418802.79050K562SF1
ZNF616ENSG00000204611.2386.80670298.107900.375702.117501.37110K562SF3B4
ZNF616ENSG00000204611.2220.76580403.87990-0.871403.335901.93740K562SNRNP200
ZNF616ENSG00000204611.2188.07170395.46200-1.0723010.285708.93540K562SRSF1
ZNF616ENSG00000204611.2468.23160363.418500.365502.169101.44160K562SYNCRIP
ZNF616ENSG00000204611.2439.27270298.832700.555703.666701.81840K562TBRG4
ZNF616ENSG00000204611.2150.01190235.91570-0.653202.853101.90250K562TIAL1
ZNF616ENSG00000204611.2503.45880277.897500.857206.947605.05630K562U2AF1
ZNF616ENSG00000204611.2716.55230287.005701.3199024.3820022.00360K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF616 is not available on ENCORE database.





9 RBPs can affect the splicing of ZNF616 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNF616ENSG00000204611.2chr19-5264270752642879526337535263384152642984526429990.524000.000000.00000includedK562AKAP8L
SEZNF616ENSG00000204611.2chr19-526256125262571052618042526202775262717552627284-0.127000.004050.03912excludedK562AQR
SEZNF616ENSG00000204611.2chr19-5264270752642879526337535263384152642984526429990.610000.000000.00000includedK562PUS1
SEZNF616ENSG00000204611.2chr19-5262561252625710526180425262027752627175526273020.475000.000010.01277includedK562KHSRP
SEZNF616ENSG00000204611.2chr19-5264270752642879526337535263384152642984526429990.528000.000020.00176includedK562UTP18
SEZNF616ENSG00000204611.2chr19-526256125262571052618042526202775262717552627302-0.151000.006190.08500excludedK562U2AF2
SEZNF616ENSG00000204611.2chr19-5264270752642879526337535263384152642984526429990.668000.000000.00001includedK562RBM15
SEZNF616ENSG00000204611.2chr19-5264270752642879526337535263384152642984526429990.551000.000000.00019includedK562AGGF1
SEZNF616ENSG00000204611.2chr19-5262561252625710526180425262027752627175526273020.368000.003570.05332includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNF616 is not avaliable on ENCORE database.