ZNF587B

General Information

Gene Name       : ZNF587B
Gene ID             : ENSG00000269343.6
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF587B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF587BENSG00000269343.68.309.068.68ENCSR000AEF
HepG2ZNF587BENSG00000269343.66.328.527.42ENCSR985KAT
K562ZNF587BENSG00000269343.612.359.5910.97ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF587B is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNF587B RNA is bound by 21 proteins.  







eCLIP assay for ZNF587B is not avaliable on ENCORE database.





21 proteins are bound to ZNF587B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr195835760058357729+3'-UTR,intron-Distal,polyA_site5.6620613.62873K562KHSRP
chr195833112358331223+3'-UTR,5'-UTR3.642863.10693HepG2UCHL5
chr195833109558331180+3'-UTR,5'-UTR3.714254.84938K562DDX3X
chr195833112358331218+3'-UTR,5'-UTR4.104704.66021K562GEMIN5
chr195833180758331898+5'-UTR,intron-Distal,intron-Proximal3.213119.03223K562BUD13
chr195834167158341730+5'-UTR,intron-Distal3.909683.76710K562NONO
chr195833127858331319+3'-UTR,5'-UTR,CDS,intron-Proximal5.245404.35676HepG2PRPF8
chr195833131258331318+5'-UTR,CDS,intron-Proximal5.8113922.62597K562AQR
chr195833134758331435+intron-Distal,intron-Proximal3.087127.72751HepG2BUD13
chr195835544058355491+intron-Distal3.271344.07077HepG2HNRNPC
chr195835163758351792+intron-Distal3.418755.61197HepG2HNRNPL
chr195833133158331444+intron-Distal,intron-Proximal4.534408.80047HepG2EFTUD2
chr195835796958358057+intron-Distal4.691266.79309HepG2ILF3
chr195836124058361311+5'-UTR,intron-Distal3.014774.55320K562NONO
chr195836736258367465+5'-UTR,intron-Distal,intron-Proximal4.5797126.45158HepG2PRPF4
chr195836675458366827+intron-Distal3.353196.10043K562ILF3
chr195835761258357725+intron-Distal3.712493.11181HepG2CSTF2
chr195833618458336232+intron-Distal4.314138.61413HepG2QKI
chr195833612258336183+intron-Distal4.210598.28561HepG2QKI
chr195833592658335982+intron-Distal4.072794.60713HepG2XPO5
chr195833599758336120+intron-Distal3.230956.87129K562KHSRP
chr195836084358360921+intron-Distal3.824883.41108HepG2FUS
chr195833617858336238+intron-Distal7.0416118.28542K562QKI
chr195833131958331414+intron-Distal,intron-Proximal3.780036.74268HepG2PRPF8
chr195835529858355342+intron-Distal4.012953.03357HepG2HNRNPC
chr195835416958354246+intron-Distal4.261715.25337K562LSM11
chr195833611858336178+intron-Distal5.1801016.63230K562QKI
chr195833956558339629+intron-Distal4.885095.20135HepG2QKI
chr195836611358366185+intron-Distal3.396023.61097K562ILF3
chr195835166858351765+intron-Distal3.821833.33062K562ILF3
chr195833131858331356+intron-Proximal5.5735028.30163K562AQR
chr195833135658331413+intron-Proximal3.710817.22920K562AQR
chr195836740258367470+5'-UTR,intron-Distal,intron-Proximal3.8709811.33023HepG2SF3B4
chr195836739658367460+5'-UTR,intron-Distal,intron-Proximal3.286463.02835K562XRCC6
chr195836741858367469+5'-UTR,intron-Distal,intron-Proximal3.107426.49635K562SF3B4
chr195836737958367461+5'-UTR,intron-Distal,intron-Proximal3.883959.91467HepG2GTF2F1
chr195836738058367463+5'-UTR,intron-Distal,intron-Proximal4.2012814.62182K562GTF2F1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNF587B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF587B is not available on ENCORE database.

  • 88 RBPs can affect the levels of ZNF587B.  








The Knockdown/knockout RNA-Seq assay for ZNF587B is not available on ENCORE database.





88 RBPs can affect the gene expression of ZNF587B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF587BENSG00000269343.2147.05060208.48520-0.503602.373101.80310HepG2ACO1
ZNF587BENSG00000269343.2107.70030187.08400-0.796702.907602.36360HepG2AKAP1
ZNF587BENSG00000269343.2266.16250358.66410-0.430302.570401.90540HepG2AUH
ZNF587BENSG00000269343.2165.99550250.05300-0.591102.701402.10950HepG2BOP1
ZNF587BENSG00000269343.2251.16370181.234300.470701.984601.32250HepG2CALR
ZNF587BENSG00000269343.2106.01560208.44470-0.975406.764205.80790HepG2CKAP4
ZNF587BENSG00000269343.2269.16700163.410700.719902.879302.09820HepG2CNOT7
ZNF587BENSG00000269343.2135.77000229.56510-0.757703.584802.81310HepG2CPSF6
ZNF587BENSG00000269343.2240.60700147.097500.709803.545302.78490HepG2DDX21
ZNF587BENSG00000269343.2249.16200156.554000.670303.490002.03740HepG2DDX47
ZNF587BENSG00000269343.265.53750153.92210-1.231805.263204.43670HepG2DDX6
ZNF587BENSG00000269343.2275.86790148.008100.898205.161304.36590HepG2EIF2S1
ZNF587BENSG00000269343.2222.1766098.774501.169406.354705.02500HepG2EIF3D
ZNF587BENSG00000269343.2314.17950163.585200.941406.045505.10440HepG2EIF4A3
ZNF587BENSG00000269343.2288.65650159.237100.858104.069703.24320HepG2EIF4B
ZNF587BENSG00000269343.2236.26100131.525600.844904.466302.31150HepG2EXOSC9
ZNF587BENSG00000269343.2152.9875088.270100.793303.452902.12840HepG2FAM120A
ZNF587BENSG00000269343.2232.85460140.104900.732803.769202.46470HepG2FASTKD2
ZNF587BENSG00000269343.2296.68690196.766600.592402.497801.43540HepG2FUS
ZNF587BENSG00000269343.2239.01990164.993500.534602.136501.52500HepG2FXR1
ZNF587BENSG00000269343.2262.89390153.085700.780004.157203.35110HepG2G3BP1
ZNF587BENSG00000269343.2294.56590162.480800.858205.226603.99000HepG2G3BP2
ZNF587BENSG00000269343.2152.58490260.23750-0.770203.691202.96060HepG2GPKOW
ZNF587BENSG00000269343.2342.39050239.073100.518103.547502.50720HepG2HNRNPA2B1
ZNF587BENSG00000269343.2227.36250135.150800.750304.279403.12070HepG2HNRNPM
ZNF587BENSG00000269343.244.24300175.31280-1.9864016.4361015.05540HepG2HNRNPU
ZNF587BENSG00000269343.2252.63160154.453000.709803.094801.78490HepG2HSPD1
ZNF587BENSG00000269343.2263.74960155.619000.761103.926603.13560HepG2IGF2BP2
ZNF587BENSG00000269343.2328.08120156.506101.067706.723505.08540HepG2KHSRP
ZNF587BENSG00000269343.2258.06630154.334000.741603.162201.82160HepG2KRR1
ZNF587BENSG00000269343.2407.98840165.050801.3055012.1588010.81890HepG2MAGOH
ZNF587BENSG00000269343.2243.39200152.196100.677203.355001.58870HepG2MARK2
ZNF587BENSG00000269343.2248.19780165.983900.580302.282001.70540HepG2MATR3
ZNF587BENSG00000269343.2179.29850103.379900.794302.430101.44250HepG2METAP2
ZNF587BENSG00000269343.2223.26430158.559600.493602.132601.41770HepG2MSI2
ZNF587BENSG00000269343.2280.69500146.364500.939305.118603.17490HepG2NKRF
ZNF587BENSG00000269343.2165.7439073.848001.166204.852102.77380HepG2PA2G4
ZNF587BENSG00000269343.2262.55010149.339500.813903.390302.40160HepG2PABPC1
ZNF587BENSG00000269343.2260.62450148.097200.815304.587103.83900HepG2PCBP1
ZNF587BENSG00000269343.2149.9021081.683200.875803.887802.42450HepG2PKM
ZNF587BENSG00000269343.289.91300206.70250-1.201006.243805.13360HepG2PRPF4
ZNF587BENSG00000269343.270.41900136.93590-0.959503.739502.81770HepG2PRPF8
ZNF587BENSG00000269343.2104.85680150.69380-0.523201.861301.39510HepG2PTBP1
ZNF587BENSG00000269343.2451.69330261.396600.789009.626708.66050HepG2PUM1
ZNF587BENSG00000269343.2409.95060261.198300.650205.117504.21910HepG2PUM2
ZNF587BENSG00000269343.278.73140148.11990-0.911803.860103.07400HepG2RBM25
ZNF587BENSG00000269343.2173.1539096.465900.843902.820301.87220HepG2SERBP1
ZNF587BENSG00000269343.2151.97930269.14040-0.824504.089603.26200HepG2SF3A3
ZNF587BENSG00000269343.2139.93820245.82060-0.812804.267103.40810HepG2SF3B1
ZNF587BENSG00000269343.2241.79550388.74390-0.685005.850805.19700HepG2SRFBP1
ZNF587BENSG00000269343.2238.41940163.761700.541802.438301.98680HepG2SRSF1
ZNF587BENSG00000269343.2149.88060255.24360-0.768104.782903.90670HepG2SRSF7
ZNF587BENSG00000269343.2215.35910133.228500.692703.970403.33320HepG2SRSF9
ZNF587BENSG00000269343.2150.47880242.04300-0.685703.235302.45770HepG2TARDBP
ZNF587BENSG00000269343.2265.90920135.252700.975207.300305.95400HepG2TIA1
ZNF587BENSG00000269343.2463.18370230.442501.0071012.2155011.09270HepG2UTP3
ZNF587BENSG00000269343.2130.36180203.97300-0.645903.274702.55470HepG2ZC3H8
ZNF587BENSG00000269343.2360.88150476.51820-0.401002.638802.08120K562AGGF1
ZNF587BENSG00000269343.2195.14140273.22280-0.485602.264001.32720K562CSTF2
ZNF587BENSG00000269343.2317.24650447.42570-0.496003.589602.20860K562DDX21
ZNF587BENSG00000269343.2687.39830559.840100.296002.310901.70660K562DDX47
ZNF587BENSG00000269343.2314.81200176.811300.832203.579701.56170K562DNAJC2
ZNF587BENSG00000269343.2147.06770373.54500-1.344808.763407.04630K562EFTUD2
ZNF587BENSG00000269343.2428.12420299.872700.513602.745801.54390K562EIF2S1
ZNF587BENSG00000269343.2351.56060491.21710-0.482603.837103.01140K562EIF2S2
ZNF587BENSG00000269343.2274.72210157.777800.800002.444001.50340K562EIF3A
ZNF587BENSG00000269343.2684.43120391.480300.805909.793708.29270K562EIF3G
ZNF587BENSG00000269343.2460.63050285.272000.691203.516602.59470K562EIF4A3
ZNF587BENSG00000269343.2361.57140487.00660-0.429702.575101.75830K562FIP1L1
ZNF587BENSG00000269343.2540.25220346.078600.642405.890303.82760K562FUS
ZNF587BENSG00000269343.2491.08670296.665400.727004.857104.08650K562FXR1
ZNF587BENSG00000269343.2666.50350277.569001.2637013.3897011.58380K562G3BP2
ZNF587BENSG00000269343.2204.19050283.94410-0.475702.177801.47160K562GPKOW
ZNF587BENSG00000269343.2495.20530654.59450-0.402602.698601.95020K562GRSF1
ZNF587BENSG00000269343.2284.90440417.01230-0.549603.055401.75440K562HNRNPK
ZNF587BENSG00000269343.2535.99630400.560100.420102.170101.34980K562HNRNPM
ZNF587BENSG00000269343.2122.84670378.07620-1.6218022.0767019.71530K562HNRNPU
ZNF587BENSG00000269343.2433.23170660.29140-0.608005.073604.00870K562HSPD1
ZNF587BENSG00000269343.2809.37350470.205600.783404.014702.28080K562ILF2
ZNF587BENSG00000269343.2378.64020589.48660-0.638605.610804.22520K562MBNL1
ZNF587BENSG00000269343.2436.30800284.904300.614802.892701.63660K562NCBP2
ZNF587BENSG00000269343.21224.78090776.558100.657308.010905.48630K562NOL12
ZNF587BENSG00000269343.2383.61420525.20330-0.453204.037903.15430K562NSUN2
ZNF587BENSG00000269343.2234.89480390.40970-0.733004.175602.96870K562PCBP2
ZNF587BENSG00000269343.2250.69900412.35880-0.717904.726903.64240K562PCBP3
ZNF587BENSG00000269343.2224.66930316.29200-0.493502.784701.98000K562POLR2G
ZNF587BENSG00000269343.2389.69900552.83470-0.504503.487702.54900K562PPIG
ZNF587BENSG00000269343.21239.13060823.878000.588708.406006.46120K562PUM1
ZNF587BENSG00000269343.2315.60470479.12270-0.602304.022803.32420K562RBM15
ZNF587BENSG00000269343.2165.29860270.05240-0.708203.346702.27580K562SF3B1
ZNF587BENSG00000269343.2193.60220288.75770-0.576803.385702.43800K562SF3B4
ZNF587BENSG00000269343.2527.69370394.519100.419502.562001.55870K562SRSF5
ZNF587BENSG00000269343.2230.29630399.27180-0.793907.619205.68310K562SRSF7
ZNF587BENSG00000269343.2569.95030403.804400.497103.841502.29550K562SSB
ZNF587BENSG00000269343.2472.47130317.250900.574504.555503.49410K562SYNCRIP
ZNF587BENSG00000269343.2478.67230272.478000.812804.033302.13200K562TAF15
ZNF587BENSG00000269343.2470.47190289.449500.700705.540303.26220K562TBRG4
ZNF587BENSG00000269343.2516.83680407.941400.341201.988401.30200K562TIA1
ZNF587BENSG00000269343.2164.64570245.87880-0.578602.417301.54540K562TIAL1
ZNF587BENSG00000269343.2141.28280261.18200-0.886505.309103.89620K562TRIM56
ZNF587BENSG00000269343.2503.24930269.206200.902507.618005.64600K562U2AF1
ZNF587BENSG00000269343.2561.47820277.981801.0141013.5148011.72240K562U2AF2
ZNF587BENSG00000269343.2667.66080417.749400.676403.131101.43160K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF587B is not available on ENCORE database.





1 RBPs can affect the splicing of ZNF587B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNF587BENSG00000269343.2chr19+583522055835252358350390583505175836747158367601-0.362000.000500.01804excludedK562AKAP8L

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNF587B is not avaliable on ENCORE database.