XPNPEP1

General Information

Gene Name : XPNPEP1
Gene ID : ENSG00000108039.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: XPNPEP1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	XPNPEP1	ENSG00000108039.17	32.03	41.41	36.72	ENCSR000AEF
HepG2	XPNPEP1	ENSG00000108039.17	34.03	26.87	30.45	ENCSR985KAT
K562	XPNPEP1	ENSG00000108039.17	45.21	44.75	44.98	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for XPNPEP1 is not avaliable on ENCORE database.

Proteins bound to RNA

XPNPEP1 RNA is bound by 7 proteins.

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eCLIP assay for XPNPEP1 is not avaliable on ENCORE database.

7 proteins are bound to XPNPEP1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	111640594	111640690	-	CDS,intron-Distal,intron-Proximal	3.33156	4.92880	K562	ZNF622
chr10	111646005	111646061	-	CDS,intron-Distal,intron-Proximal	4.58034	4.04372	HepG2	BCLAF1
chr10	111637440	111637487	-	intron-Distal,intron-Proximal	4.62363	3.62536	K562	AQR
chr10	111650318	111650398	-	intron-Distal	3.37629	3.60923	HepG2	HNRNPL
chr10	111651478	111651549	-	CDS,intron-Distal,intron-Proximal	3.35273	3.47879	HepG2	PPIG
chr10	111629709	111629767	-	CDS,intron-Distal,intron-Proximal	3.46159	3.27569	HepG2	BCLAF1
chr10	111635314	111635370	-	CDS,intron-Distal,intron-Proximal	4.15228	3.25089	HepG2	AQR
chr10	111648322	111648357	-	CDS,intron-Distal,intron-Proximal	3.76718	3.05161	HepG2	PPIG
chr10	111678491	111678593	-	intron-Distal	3.97210	3.03891	HepG2	PTBP1
chr10	111648273	111648381	-	CDS,intron-Distal,intron-Proximal	3.22426	3.01994	K562	BUD13
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 10 entries

eCLIP assay for XPNPEP1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for XPNPEP1 is not available on ENCORE database.
53 RBPs can affect the levels of XPNPEP1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for XPNPEP1 is not available on ENCORE database.

53 RBPs can affect the gene expression of XPNPEP1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
XPNPEP1	ENSG00000108039.13	2215.59410	1267.49550	0.80560	12.47360	11.36740	K562	PUS1
XPNPEP1	ENSG00000108039.13	989.78670	1777.38490	-0.84460	13.34620	11.04150	K562	MSI2
XPNPEP1	ENSG00000108039.13	1364.28750	731.25580	0.89960	11.46310	10.30640	HepG2	EIF2S1
XPNPEP1	ENSG00000108039.13	1635.56450	1137.87760	0.52330	10.11840	9.32310	HepG2	SRFBP1
XPNPEP1	ENSG00000108039.13	1292.37420	914.50790	0.49890	9.53360	8.67250	HepG2	ZNF622
XPNPEP1	ENSG00000108039.13	1453.07720	1007.43520	0.52830	8.03130	7.25610	HepG2	RBM22
XPNPEP1	ENSG00000108039.13	422.91450	845.06160	-0.99870	8.19630	5.67220	HepG2	RTF1
XPNPEP1	ENSG00000108039.13	287.78660	630.97680	-1.13260	7.23720	5.45570	HepG2	NONO
XPNPEP1	ENSG00000108039.13	1008.54480	651.90200	0.62940	6.48200	5.29450	HepG2	MSI2
XPNPEP1	ENSG00000108039.13	1437.49190	924.41780	0.63680	5.46800	4.74970	HepG2	AKAP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 59 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for XPNPEP1 is not available on ENCORE database.

14 RBPs can affect the splicing of XPNPEP1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	XPNPEP1	ENSG00000108039.13	chr10	-	111633124	111633335	111633124	111633185	111635285	111635357	0.07600	0.00000	0.00006	longer	K562	AGGF1
A3SS	XPNPEP1	ENSG00000108039.13	chr10	-	111667448	111667690	111667448	111667573	111674768	111674857	0.05700	0.00000	0.00005	longer	K562	AQR
SE	XPNPEP1	ENSG00000108039.13	chr10	-	111630488	111630662	111629710	111629787	111631549	111631619	-0.32600	0.00001	0.00029	excluded	HepG2	U2AF1
A3SS	XPNPEP1	ENSG00000108039.13	chr10	-	111633124	111633335	111633124	111633185	111635285	111635357	0.06100	0.00001	0.00462	longer	K562	UTP18
SE	XPNPEP1	ENSG00000108039.13	chr10	-	111652769	111652833	111651479	111651584	111667448	111667573	0.12300	0.00002	0.00313	included	HepG2	AKAP1
A3SS	XPNPEP1	ENSG00000108039.13	chr10	-	111633124	111633335	111633124	111633185	111635285	111635357	0.05700	0.00002	0.00403	longer	K562	AKAP8L
A3SS	XPNPEP1	ENSG00000108039.13	chr10	-	111633124	111633335	111633124	111633185	111635285	111635357	0.05400	0.00002	0.00428	longer	K562	RBM15
RI	XPNPEP1	ENSG00000108039.13	chr10	-	111635285	111637625	111635285	111635357	111637547	111637625	0.29100	0.00002	0.00050	included	HepG2	QKI
A3SS	XPNPEP1	ENSG00000108039.13	chr10	-	111633124	111633335	111633124	111633185	111635285	111635357	0.17300	0.00004	0.00258	longer	K562	U2AF2
SE	XPNPEP1	ENSG00000108039.13	chr10	-	111630488	111630662	111629710	111629787	111631549	111631619	-0.18800	0.00007	0.00141	excluded	HepG2	U2AF2

Showing 1 to 10 of 20 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

XPNPEP1

General Information

Functions

Localization

Domains (AlphaFold: XPNPEP1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for XPNPEP1 is not avaliable on ENCORE database.

7 proteins are bound to XPNPEP1 RNA:

eCLIP assay for XPNPEP1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for XPNPEP1 is not available on ENCORE database.

53 RBPs can affect the gene expression of XPNPEP1 :

The Knockdown/knockout RNA-Seq assay for XPNPEP1 is not available on ENCORE database.

14 RBPs can affect the splicing of XPNPEP1 :

The Knockdown/knockout RNA-Seq assay for XPNPEP1 is not avaliable on ENCORE database.