UBL5

General Information

Gene Name : UBL5
Gene ID : ENSG00000198258.10
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: UBL5)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	UBL5	ENSG00000198258.10	214.79	294.73	254.76	ENCSR000AEF
HepG2	UBL5	ENSG00000198258.10	320.94	306.52	313.73	ENCSR985KAT
K562	UBL5	ENSG00000198258.10	435.12	412.53	423.82	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for UBL5 is not avaliable on ENCORE database.

Proteins bound to RNA

UBL5 RNA is bound by 24 proteins.

CanvasJS.com

eCLIP assay for UBL5 is not avaliable on ENCORE database.

24 proteins are bound to UBL5 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	9940687	9940761	+	3'-UTR	7.07621	99.77144	HepG2	LARP4
chr19	9938587	9938647	+	5'-UTR,intron-Proximal	4.74466	62.84424	K562	DDX3X
chr19	9939024	9939069	+	CDS,intron-Proximal	3.38097	51.18735	K562	DDX3X
chr19	9940671	9940755	+	3'-UTR,CDS	3.53980	49.96549	K562	PABPC4
chr19	9938596	9938662	+	5'-UTR,intron-Proximal	4.79008	46.38631	HepG2	DDX3X
chr19	9940660	9940687	+	3'-UTR,CDS	5.86290	44.85970	HepG2	LARP4
chr19	9940681	9940716	+	3'-UTR	4.12910	43.87491	K562	TIA1
chr19	9940716	9940730	+	3'-UTR	4.36083	43.25760	K562	TIA1
chr19	9939002	9939024	+	5'-UTR,CDS,intron-Proximal	3.72832	41.28765	K562	DDX3X
chr19	9938647	9938661	+	5'-UTR,intron-Proximal	4.12354	40.71496	K562	DDX3X
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 80 entries

eCLIP assay for UBL5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for UBL5 is not available on ENCORE database.
79 RBPs can affect the levels of UBL5.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for UBL5 is not available on ENCORE database.

79 RBPs can affect the gene expression of UBL5 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
UBL5	ENSG00000198258.6	2029.03610	1073.42750	0.91850	27.22620	25.56160	K562	AGGF1
UBL5	ENSG00000198258.6	2531.19650	1107.64710	1.19220	26.59000	24.90050	K562	PUS1
UBL5	ENSG00000198258.6	773.31250	1420.88260	-0.87770	21.88990	20.43920	HepG2	RECQL
UBL5	ENSG00000198258.6	2278.04940	1089.24850	1.06440	20.17440	18.14000	K562	PRPF8
UBL5	ENSG00000198258.6	2189.26750	1116.95980	0.97080	19.87500	17.80940	K562	AKAP8L
UBL5	ENSG00000198258.6	766.68840	1211.99620	-0.66070	13.39050	12.33860	HepG2	SRSF9
UBL5	ENSG00000198258.6	1931.13000	1079.29370	0.83930	13.11800	11.82220	K562	RBM15
UBL5	ENSG00000198258.6	713.33410	1230.45970	-0.78650	12.96660	11.18740	HepG2	TIA1
UBL5	ENSG00000198258.6	4804.68920	2586.89130	0.89310	10.40330	9.37530	K562	AQR
UBL5	ENSG00000198258.6	954.86960	519.81700	0.87720	10.20760	8.75340	HepG2	UCHL5
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 84 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for UBL5 is not available on ENCORE database.

12 RBPs can affect the splicing of UBL5 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
A5SS	UBL5	ENSG00000198258.6	chr19	+	9938567	9938740			9938567	9938660	9939002	9939052	0.05300	0.00129	longer	K562	TARDBP
A5SS	UBL5	ENSG00000198258.6	chr19	+	9938567	9938740			9938567	9938660	9939002	9939069	-0.05400	0.00016	shorter	HepG2	SRSF9
A5SS	UBL5	ENSG00000198258.6	chr19	+	9938567	9938740			9938567	9938660	9939002	9939069	0.06800	0.00008	longer	HepG2	BCCIP
RI	UBL5	ENSG00000198258.6	chr19	+	9939002	9939351			9939002	9939069	9939267	9939351	0.14000	0.00000	included	HepG2	SF3A3
RI	UBL5	ENSG00000198258.6	chr19	+	9939002	9939351			9939002	9939069	9939267	9939351	0.06500	0.00000	included	HepG2	SRSF1
RI	UBL5	ENSG00000198258.6	chr19	+	9939002	9939351			9939002	9939069	9939267	9939351	0.06500	0.00005	included	HepG2	TIAL1
RI	UBL5	ENSG00000198258.6	chr19	+	9939002	9939351			9939002	9939069	9939267	9939351	0.11800	0.00000	included	HepG2	SF3B4
RI	UBL5	ENSG00000198258.6	chr19	+	9939002	9939351			9939002	9939069	9939267	9939351	0.13600	0.00000	included	K562	AQR
MXE	UBL5	ENSG00000198258.6	chr19	+	9939002	9939052	9939212	9939351	9938567	9938660	9939512	9939550	0.15400	0.00000	1included	K562	SRSF1
MXE	UBL5	ENSG00000198258.6	chr19	+	9939002	9939069	9939512	9939550	9938567	9938740	9940640	9940791	0.10700	0.00000	1included	K562	TARDBP

Showing 1 to 10 of 15 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

UBL5

General Information

Functions

Localization

Domains (AlphaFold: UBL5)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for UBL5 is not avaliable on ENCORE database.

24 proteins are bound to UBL5 RNA:

eCLIP assay for UBL5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for UBL5 is not available on ENCORE database.

79 RBPs can affect the gene expression of UBL5 :

The Knockdown/knockout RNA-Seq assay for UBL5 is not available on ENCORE database.

12 RBPs can affect the splicing of UBL5 :

The Knockdown/knockout RNA-Seq assay for UBL5 is not avaliable on ENCORE database.