TMEM126B

General Information

Gene Name : TMEM126B
Gene ID : ENSG00000171204.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TMEM126B)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TMEM126B	ENSG00000171204.12	68.52	45.30	56.91	ENCSR000AEF
HepG2	TMEM126B	ENSG00000171204.12	30.88	53.70	42.29	ENCSR985KAT
K562	TMEM126B	ENSG00000171204.12	93.83	96.51	95.17	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TMEM126B is not avaliable on ENCORE database.

Proteins bound to RNA

TMEM126B RNA is bound by 8 proteins.

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eCLIP assay for TMEM126B is not avaliable on ENCORE database.

8 proteins are bound to TMEM126B RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	85342518	85342648	+	intron-Distal,intron-Proximal	4.75780	11.50600	HepG2	QKI
chr11	85339642	85339735	+	5'-UTR,CDS,intron-Proximal	3.28803	10.22714	K562	DDX3X
chr11	85342521	85342699	+	intron-Distal,intron-Proximal	4.89452	9.72850	K562	QKI
chr11	85346884	85346957	+	3'-UTR,intron-Distal,intron-Proximal	4.23554	9.06734	HepG2	U2AF2
chr11	85345256	85345363	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.43455	8.79239	K562	KHSRP
chr11	85346957	85347049	+	3'-UTR,intron-Distal,intron-Proximal	3.70666	5.36861	HepG2	U2AF2
chr11	85339638	85339742	+	5'-UTR,CDS,intron-Proximal	3.89081	5.11373	HepG2	NCBP2
chr11	85346884	85346960	+	3'-UTR,intron-Distal,intron-Proximal	4.35982	4.90467	K562	U2AF2
chr11	85347079	85347143	+	3'-UTR,CDS,intron-Proximal	3.25039	4.81700	HepG2	U2AF2
chr11	85347449	85347520	+	3'-UTR	4.66334	4.61859	K562	IGF2BP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 14 entries

eCLIP assay for TMEM126B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TMEM126B is not available on ENCORE database.
43 RBPs can affect the levels of TMEM126B.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TMEM126B is not available on ENCORE database.

43 RBPs can affect the gene expression of TMEM126B :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TMEM126B	ENSG00000171204.8	652.07890	387.15910	0.75200	9.19970	8.44960	HepG2	SRSF1
TMEM126B	ENSG00000171204.8	1162.65710	1905.87320	-0.71300	6.16670	5.35030	K562	AQR
TMEM126B	ENSG00000171204.8	968.45120	688.82710	0.49140	5.92260	5.08650	K562	FXR1
TMEM126B	ENSG00000171204.8	379.25370	215.58290	0.81480	6.06640	4.93410	HepG2	UCHL5
TMEM126B	ENSG00000171204.8	875.97090	1189.54160	-0.44150	5.94020	4.51410	K562	BCLAF1
TMEM126B	ENSG00000171204.8	453.30010	274.83110	0.72180	4.95790	4.13080	HepG2	U2AF1
TMEM126B	ENSG00000171204.8	341.52310	493.45140	-0.53090	4.85190	3.96370	HepG2	SLBP
TMEM126B	ENSG00000171204.8	817.68450	1127.91720	-0.46400	4.84510	3.44150	K562	HNRNPA1
TMEM126B	ENSG00000171204.8	954.97720	1249.09400	-0.38730	4.27130	3.15280	K562	HNRNPU
TMEM126B	ENSG00000171204.8	1094.57530	798.05210	0.45570	3.41410	2.82010	K562	PUS1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 44 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TMEM126B is not available on ENCORE database.

46 RBPs can affect the splicing of TMEM126B :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	TMEM126B	ENSG00000171204.8	chr11	+	85342188	85342360	85339661	85339732	85342730	85342852	0.32900	0.00000	included	HepG2	G3BP1
SE	TMEM126B	ENSG00000171204.8	chr11	+	85342188	85342360	85339648	85339732	85342730	85342835	-0.32100	0.00000	excluded	K562	SRSF1
SE	TMEM126B	ENSG00000171204.8	chr11	+	85342188	85342360	85339661	85339732	85342730	85342852	-0.19200	0.00000	excluded	K562	SF3B4
SE	TMEM126B	ENSG00000171204.8	chr11	+	85342730	85342852	85339628	85339732	85345129	85345323	-0.17300	0.00000	excluded	K562	PRPF8
SE	TMEM126B	ENSG00000171204.8	chr11	+	85342188	85342360	85339661	85339732	85342730	85342852	-0.25500	0.00031	excluded	HepG2	RBM22
SE	TMEM126B	ENSG00000171204.8	chr11	+	85342188	85342360	85339648	85339732	85342730	85342835	-0.31500	0.00000	excluded	HepG2	U2AF1
SE	TMEM126B	ENSG00000171204.8	chr11	+	85342188	85342360	85339661	85339732	85342730	85342852	-0.22100	0.00006	excluded	HepG2	AKAP1
SE	TMEM126B	ENSG00000171204.8	chr11	+	85342188	85342360	85339661	85339732	85342730	85342852	-0.19100	0.00005	excluded	K562	METAP2
SE	TMEM126B	ENSG00000171204.8	chr11	+	85342730	85342852	85339628	85339732	85345129	85345323	-0.13500	0.00000	excluded	K562	AQR
SE	TMEM126B	ENSG00000171204.8	chr11	+	85342188	85342360	85339661	85339732	85342730	85342852	-0.23000	0.00003	excluded	HepG2	DDX3X

Showing 1 to 10 of 95 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TMEM126B

General Information

Functions

Localization

Domains (AlphaFold: TMEM126B)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TMEM126B is not avaliable on ENCORE database.

8 proteins are bound to TMEM126B RNA:

eCLIP assay for TMEM126B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TMEM126B is not available on ENCORE database.

43 RBPs can affect the gene expression of TMEM126B :

The Knockdown/knockout RNA-Seq assay for TMEM126B is not available on ENCORE database.

46 RBPs can affect the splicing of TMEM126B :

The Knockdown/knockout RNA-Seq assay for TMEM126B is not avaliable on ENCORE database.