STYXL1

General Information

Gene Name       : STYXL1
Gene ID             : ENSG00000127952.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: STYXL1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878STYXL1ENSG00000127952.1636.8130.1433.48ENCSR000AEF
HepG2STYXL1ENSG00000127952.1627.3327.9927.66ENCSR985KAT
K562STYXL1ENSG00000127952.1652.1355.6453.89ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for STYXL1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • STYXL1 RNA is bound by 5 proteins.  







eCLIP assay for STYXL1 is not avaliable on ENCORE database.





5 proteins are bound to STYXL1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr77563314375633173-3'-UTR,CDS,intron-Distal3.347754.47973K562YBX3
chr77563457675634597-3'-UTR,CDS,intron-Distal,intron-Proximal3.790953.22721K562YBX3
chr77567718875677297-5'-UTR,intron-Distal,intron-Proximal4.221156.42503K562DDX3X
chr77565973875659789-CDS,intron-Distal,intron-Proximal3.115895.38711K562YBX3
chr77565117075651190-CDS,intron-Distal3.719593.43253K562YBX3
chr77565799275658021-CDS,intron-Distal,intron-Proximal3.196623.90824K562YBX3
chr77567139475671458-intron-Distal3.757476.22518HepG2HNRNPL
chr77565657775656661-intron-Distal4.674864.86763HepG2PCBP2
chr77563510275635192-intron-Distal4.793324.90095K562PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for STYXL1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for STYXL1 is not available on ENCORE database.

  • 65 RBPs can affect the levels of STYXL1.  








The Knockdown/knockout RNA-Seq assay for STYXL1 is not available on ENCORE database.





65 RBPs can affect the gene expression of STYXL1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
STYXL1ENSG00000127952.12407.02690280.861700.535204.372803.64170HepG2ACO1
STYXL1ENSG00000127952.12187.20070268.65250-0.521202.401601.47030HepG2ADAR
STYXL1ENSG00000127952.12786.12910525.946100.579803.851303.23880HepG2AKAP1
STYXL1ENSG00000127952.12722.66870398.822200.8575013.2858012.08350HepG2CELF1
STYXL1ENSG00000127952.12376.66730248.919200.597503.722102.94490HepG2DDX21
STYXL1ENSG00000127952.12749.31000503.856800.572404.217803.45830HepG2DDX3X
STYXL1ENSG00000127952.12581.49810432.728600.426202.198401.64160HepG2DDX6
STYXL1ENSG00000127952.12175.66100274.47950-0.643903.714602.74800HepG2EWSR1
STYXL1ENSG00000127952.12249.21960334.07000-0.422702.014801.33520HepG2FUBP3
STYXL1ENSG00000127952.12275.08210430.36320-0.645703.931403.14480HepG2G3BP1
STYXL1ENSG00000127952.12271.61300192.640900.495501.838301.30910HepG2GPKOW
STYXL1ENSG00000127952.12379.78960273.116500.475602.510501.89200HepG2HNRNPA1
STYXL1ENSG00000127952.12183.14280303.78790-0.730104.160403.32300HepG2HNRNPC
STYXL1ENSG00000127952.12571.97540435.612500.392802.209101.57980HepG2HNRNPK
STYXL1ENSG00000127952.12278.26640183.841100.597902.770602.14060HepG2HNRNPLL
STYXL1ENSG00000127952.12331.64260215.685200.620603.437202.53700HepG2MSI2
STYXL1ENSG00000127952.12343.46790477.64280-0.475802.463701.86490HepG2NCBP2
STYXL1ENSG00000127952.12113.35980258.37630-1.188606.275304.90260HepG2PABPC1
STYXL1ENSG00000127952.12273.50730425.45570-0.637403.916503.06830HepG2PABPC4
STYXL1ENSG00000127952.12305.32660425.33040-0.478203.562802.89250HepG2PCBP1
STYXL1ENSG00000127952.12173.46400254.29380-0.551902.995902.19560HepG2PRPF4
STYXL1ENSG00000127952.12327.88710432.79650-0.400502.380001.86610HepG2PTBP1
STYXL1ENSG00000127952.12236.64960405.90510-0.778406.036405.20040HepG2PUF60
STYXL1ENSG00000127952.12326.42500468.71460-0.522003.736503.02770HepG2QKI
STYXL1ENSG00000127952.12107.50390237.16990-1.141505.003304.07000HepG2RAVER1
STYXL1ENSG00000127952.12693.65850386.646800.8431010.9390010.05730HepG2RBM22
STYXL1ENSG00000127952.12181.12030425.39420-1.2319013.6622012.23150HepG2RBM25
STYXL1ENSG00000127952.12298.63030481.65520-0.689606.300805.53980HepG2NELFE
STYXL1ENSG00000127952.12293.49600448.60680-0.612105.126804.32200HepG2RECQL
STYXL1ENSG00000127952.12152.44220268.75030-0.818005.100404.27380HepG2SAFB2
STYXL1ENSG00000127952.12116.25080181.96430-0.646402.470601.80120HepG2SF3B1
STYXL1ENSG00000127952.12334.30220450.58470-0.430602.839602.24130HepG2SF3B4
STYXL1ENSG00000127952.12375.86630202.468000.892404.632303.61060HepG2SNRNP70
STYXL1ENSG00000127952.12551.40450436.682800.336402.062101.60940HepG2SRFBP1
STYXL1ENSG00000127952.12316.08960470.31790-0.573304.756004.17860HepG2SRSF1
STYXL1ENSG00000127952.12307.34250400.78030-0.383002.282801.70740HepG2SRSF5
STYXL1ENSG00000127952.12213.12620382.63300-0.844308.543407.66750HepG2SRSF9
STYXL1ENSG00000127952.12338.05220232.934100.537202.196501.58400HepG2SUPV3L1
STYXL1ENSG00000127952.12288.78310422.75400-0.549804.046803.38890HepG2TAF15
STYXL1ENSG00000127952.12275.73210388.43850-0.494403.129202.24440HepG2TIA1
STYXL1ENSG00000127952.12225.84660295.85580-0.389602.121801.61550HepG2TRIM56
STYXL1ENSG00000127952.12200.55060137.597800.543402.098001.43780HepG2UCHL5
STYXL1ENSG00000127952.12274.50920195.530200.489402.747702.05020HepG2UPF1
STYXL1ENSG00000127952.12135.36690188.77610-0.479801.861501.34920HepG2UTP3
STYXL1ENSG00000127952.12317.05660215.045200.560004.031303.40420HepG2ZNF622
STYXL1ENSG00000127952.12712.545101119.98150-0.652406.285105.45990K562AQR
STYXL1ENSG00000127952.12246.12060373.30010-0.601003.785502.51410K562CCAR1
STYXL1ENSG00000127952.12263.64410372.90530-0.500202.895002.09460K562CPSF6
STYXL1ENSG00000127952.12966.68580668.897700.531207.197206.21470K562DDX47
STYXL1ENSG00000127952.12283.60980417.88510-0.559203.488001.97300K562DHX30
STYXL1ENSG00000127952.12922.82750731.335900.335402.984302.24200K562EIF2S2
STYXL1ENSG00000127952.12374.15600512.45620-0.453802.755301.90890K562FIP1L1
STYXL1ENSG00000127952.12370.26060534.02840-0.528403.259101.69300K562GEMIN5
STYXL1ENSG00000127952.121273.82360974.502900.386303.132902.33030K562GRSF1
STYXL1ENSG00000127952.12383.53140599.08490-0.643402.461101.33140K562HNRNPA2B1
STYXL1ENSG00000127952.12845.89610604.488600.484704.435403.06310K562HNRNPL
STYXL1ENSG00000127952.121003.77410805.563300.317302.746001.85550K562HNRNPU
STYXL1ENSG00000127952.121155.56900694.728100.734008.911207.49730K562HSPD1
STYXL1ENSG00000127952.121134.83050815.260400.477003.590102.64210K562PCBP3
STYXL1ENSG00000127952.12938.38770625.335800.585506.945005.68440K562POLR2G
STYXL1ENSG00000127952.12804.18400581.794400.466903.636102.67680K562PPIG
STYXL1ENSG00000127952.12971.532101240.91580-0.353103.149202.28160K562PUF60
STYXL1ENSG00000127952.12670.95260814.15120-0.279102.118401.58630K562RBM15
STYXL1ENSG00000127952.12240.16080422.60930-0.815306.905604.70020K562RBM25
STYXL1ENSG00000127952.12872.91180527.964100.725306.340705.09210K562RPS19
STYXL1ENSG00000127952.12394.83930641.74930-0.700707.155006.02590K562SRSF1
STYXL1ENSG00000127952.12820.36590649.508200.336802.074401.45560K562TARDBP
STYXL1ENSG00000127952.12558.52280446.037300.324402.044901.35540K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for STYXL1 is not available on ENCORE database.





22 RBPs can affect the splicing of STYXL1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESTYXL1ENSG00000127952.12chr7-756302077563032075625726756259177563307575633173-0.127000.003690.05869excludedK562SF3B4
SESTYXL1ENSG00000127952.12chr7-756430597564320575634576756347227565116875651310-0.192000.000100.00573excludedK562PRPF8
SESTYXL1ENSG00000127952.12chr7-756302077563032075625659756259177563307575633173-0.144000.008960.08363excludedHepG2U2AF2
SESTYXL1ENSG00000127952.12chr7-756430597564320575634576756347227565116875651310-0.142000.000180.00281excludedK562AQR
SESTYXL1ENSG00000127952.12chr7-756302077563027275625659756259177563307575633173-0.201000.003060.09014excludedK562FXR1
SESTYXL1ENSG00000127952.12chr7-756430597564320575634576756347227565116875651310-0.156000.001330.04951excludedK562FXR1
SESTYXL1ENSG00000127952.12chr7-756629537566302475659738756598427567712975677271-0.121000.000000.00258excludedK562DROSHA
SESTYXL1ENSG00000127952.12chr7-7563020775630320756257267562591775633075756331730.139000.000830.09211includedK562LARP4
SESTYXL1ENSG00000127952.12chr7-7565994075659991756597387565984275677129756772710.078000.000800.04354includedK562EFTUD2
SESTYXL1ENSG00000127952.12chr7-756430597564320575634576756347227565116875651310-0.164000.000390.02489excludedK562EFTUD2
SESTYXL1ENSG00000127952.12chr7-756599407565999175659738756598427567712975677271-0.068000.004360.07301excludedK562U2AF1
SESTYXL1ENSG00000127952.12chr7-756629537566302475659738756598427567712975677271-0.129000.000010.00256excludedK562HNRNPUL1
SESTYXL1ENSG00000127952.12chr7-756430597564320575634576756347227565116875651310-0.124000.005560.07890excludedK562U2AF2
SESTYXL1ENSG00000127952.12chr7-756599407565999175659738756598427567712975677322-0.068000.001180.02296excludedK562U2AF2
SESTYXL1ENSG00000127952.12chr7-756302077563032075625726756259177563307575633173-0.136000.001180.04311excludedK562TARDBP
SESTYXL1ENSG00000127952.12chr7-756430597564320575634576756347227565116875651310-0.100000.001260.04467excludedK562HNRNPU
SESTYXL1ENSG00000127952.12chr7-756430597564320575634576756347227565795975658021-0.051000.005600.09940excludedK562RBM15
SESTYXL1ENSG00000127952.12chr7-756302077563032075625726756259177563307575633173-0.150000.000340.02002excludedK562HNRNPK
SESTYXL1ENSG00000127952.12chr7-756629537566302475659738756598427567712975677271-0.103000.000670.09344excludedK562NPM1
SESTYXL1ENSG00000127952.12chr7-756430597564320575634576756347227565116875651310-0.180000.000000.00008excludedK562HNRNPC
A3SSSTYXL1ENSG00000127952.12chr7-7565973875659882756597387565984575677129756772710.222000.000000.00001longerK562AQR
MXESTYXL1ENSG00000127952.12chr7-75657959756580217565973875659842756511687565131075677129756772980.203000.000410.010081includedK562DROSHA
MXESTYXL1ENSG00000127952.12chr7-75657959756580217565973875659845756511687565131075677129756772710.192000.004400.094911includedK562XRN2
MXESTYXL1ENSG00000127952.12chr7-7565795975658021756597387565984575651168756513107567712975677271-0.150000.004170.057032includedK562SRSF1
MXESTYXL1ENSG00000127952.12chr7-7565116875651310756579597565802175634576756347227565973875659842-0.142000.001610.059022includedK562FXR1
MXESTYXL1ENSG00000127952.12chr7-7565116875651310756597387565984275634576756347227567712975677298-0.173000.002090.071412includedK562FXR1
MXESTYXL1ENSG00000127952.12chr7-75657959756580217565973875659882756511687565131075677129756772710.059000.001550.013361includedK562AQR
MXESTYXL1ENSG00000127952.12chr7-7565795975658021756597387565984575634576756347227567712975677271-0.191000.011020.068462includedK562AQR
MXESTYXL1ENSG00000127952.12chr7-7565116875651310756579597565802175634576756347227565973875659842-0.119000.000250.002702includedK562AQR
MXESTYXL1ENSG00000127952.12chr7-7565795975658021756597387565984275651168756513107567712975677298-0.155000.001010.092262includedK562PCBP1
MXESTYXL1ENSG00000127952.12chr7-7563020775630320756330757563317375625683756259177563457675634722-0.152000.005590.098312includedHepG2TIAL1
MXESTYXL1ENSG00000127952.12chr7-7565116875651310756579597565802175643070756432057565973875659842-0.280000.001740.039832includedK562FXR2
MXESTYXL1ENSG00000127952.12chr7-75651168756513107565795975658021756430597564320575659738756598420.137000.001830.034431includedK562HNRNPUL1
MXESTYXL1ENSG00000127952.12chr7-75657959756580217565973875659842756511687565131075677129756772980.181000.000750.055651includedK562SERBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for STYXL1 is not avaliable on ENCORE database.