RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
---|
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
---|---|---|---|---|---|---|---|---|
chr7 | 105180538 | 105180637 | + | intron-Distal | 3.50141 | 38.99448 | K562 | SF3B4 |
chr7 | 105183006 | 105183069 | + | 3'-UTR,5'-UTR,CDS | 3.10437 | 18.72527 | K562 | ZNF622 |
chr7 | 105180442 | 105180473 | + | intron-Distal | 3.96254 | 17.99345 | K562 | KHSRP |
chr7 | 105177080 | 105177190 | + | 5'-UTR,CDS,intron-Distal,intron-Proximal | 3.51792 | 17.78747 | K562 | ZNF622 |
chr7 | 105180476 | 105180500 | + | intron-Distal | 4.01599 | 13.94997 | K562 | KHSRP |
chr7 | 105187355 | 105187423 | + | 3'-UTR,5'-UTR,CDS,intron-Proximal | 3.05940 | 13.80134 | K562 | ZNF622 |
chr7 | 105177309 | 105177372 | + | intron-Distal | 3.43582 | 13.16099 | K562 | KHSRP |
chr7 | 105172658 | 105172788 | + | 5'-UTR,CDS | 3.78555 | 13.09014 | K562 | DDX3X |
chr7 | 105190453 | 105190540 | + | 3'-UTR,CDS,intron-Proximal | 4.01943 | 10.90247 | K562 | SF3B4 |
chr7 | 105187354 | 105187417 | + | 3'-UTR,5'-UTR,CDS,intron-Proximal | 3.13380 | 10.88164 | K562 | DDX24 |
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|
RINT1 | ENSG00000135249.3 | 4588.82680 | 1816.90540 | 1.33650 | 26.81460 | 25.11660 | K562 | PUS1 | |
RINT1 | ENSG00000135249.3 | 3182.07160 | 1770.60640 | 0.84560 | 18.47480 | 16.90660 | K562 | RBM15 | |
RINT1 | ENSG00000135249.3 | 4481.86280 | 2510.64090 | 0.83590 | 16.26910 | 15.00560 | K562 | AQR | |
RINT1 | ENSG00000135249.3 | 2708.57410 | 1687.97330 | 0.68210 | 13.76170 | 11.95420 | K562 | U2AF2 | |
RINT1 | ENSG00000135249.3 | 3061.93910 | 1832.43670 | 0.74060 | 13.52590 | 11.91810 | K562 | AKAP8L | |
RINT1 | ENSG00000135249.3 | 175.90690 | 361.73550 | -1.04010 | 7.41560 | 6.39750 | HepG2 | GPKOW | |
RINT1 | ENSG00000135249.3 | 677.07680 | 457.31040 | 0.56600 | 6.10040 | 5.46530 | HepG2 | SRSF1 | |
RINT1 | ENSG00000135249.3 | 3398.91980 | 1944.49240 | 0.80560 | 6.87730 | 5.43790 | K562 | KIF1C | |
RINT1 | ENSG00000135249.3 | 2536.47720 | 1760.98540 | 0.52630 | 6.18480 | 5.38830 | K562 | AGGF1 | |
RINT1 | ENSG00000135249.3 | 2798.42830 | 1922.76480 | 0.54130 | 6.01120 | 4.59940 | K562 | ATP5C1 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SE | RINT1 | ENSG00000135249.3 | chr7 | + | 105205976 | 105206095 | 105205682 | 105205904 | 105207565 | 105208124 | -0.14200 | 0.00000 | 0.00000 | excluded | K562 | AQR | |||
SE | RINT1 | ENSG00000135249.3 | chr7 | + | 105195474 | 105195674 | 105192016 | 105192154 | 105204179 | 105204394 | -0.13300 | 0.00000 | 0.00000 | excluded | K562 | AQR | |||
SE | RINT1 | ENSG00000135249.3 | chr7 | + | 105189275 | 105189414 | 105189000 | 105189157 | 105190501 | 105190612 | 0.36800 | 0.00000 | 0.00003 | included | K562 | HNRNPC | |||
SE | RINT1 | ENSG00000135249.3 | chr7 | + | 105176018 | 105176138 | 105173270 | 105173316 | 105177011 | 105177196 | 0.45500 | 0.00000 | 0.00000 | included | K562 | HNRNPC | |||
SE | RINT1 | ENSG00000135249.3 | chr7 | + | 105195474 | 105195674 | 105192016 | 105192154 | 105204179 | 105204394 | -0.20600 | 0.00000 | 0.00000 | excluded | K562 | HNRNPC | |||
A3SS | RINT1 | ENSG00000135249.3 | chr7 | + | 105190473 | 105190612 | 105190501 | 105190612 | 105189000 | 105189157 | 0.08800 | 0.00000 | 0.00000 | longer | K562 | AQR | |||
MXE | RINT1 | ENSG00000135249.3 | chr7 | + | 105191955 | 105192154 | 105195498 | 105195674 | 105190707 | 105190933 | 105204179 | 105204394 | 0.15000 | 0.00000 | 0.00000 | 1included | K562 | AQR | |
MXE | RINT1 | ENSG00000135249.3 | chr7 | + | 105191967 | 105192154 | 105195498 | 105195674 | 105190707 | 105190933 | 105204179 | 105204394 | 0.15800 | 0.00000 | 0.00000 | 1included | K562 | AQR | |
MXE | RINT1 | ENSG00000135249.3 | chr7 | + | 105191907 | 105192154 | 105195498 | 105195674 | 105190707 | 105190933 | 105204179 | 105204394 | 0.14700 | 0.00000 | 0.00000 | 1included | K562 | AQR | |
MXE | RINT1 | ENSG00000135249.3 | chr7 | + | 105190473 | 105190612 | 105190707 | 105190933 | 105189000 | 105189157 | 105192016 | 105192154 | 0.08100 | 0.00000 | 0.00000 | 1included | K562 | AQR |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".