PRKRIR

General Information

Gene Name : PRKRIR
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PRKRIR)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PRKRIR is not avaliable on ENCORE database.

Proteins bound to RNA

PRKRIR RNA is bound by 6 proteins.

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eCLIP assay for PRKRIR is not avaliable on ENCORE database.

6 proteins are bound to PRKRIR RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	76091879	76091935	-	5'-UTR,CDS,intron-Distal	4.72500	10.30616	HepG2	DDX3X
chr11	76091791	76091835	-	CDS,intron-Distal	4.16991	7.63030	HepG2	DDX3X
chr11	76091826	76091930	-	5'-UTR,CDS,intron-Distal	4.71468	7.13477	K562	DDX3X
chr11	76071919	76072000	-	intron-Distal,intron-Proximal	5.13850	6.75320	K562	AQR
chr11	76091791	76091825	-	CDS,intron-Distal	5.22436	5.82881	K562	DDX3X
chr11	76061641	76061684	-	3'-UTR,intron-Distal	4.62853	4.55095	K562	YBX3
chr11	76076815	76076930	-	CDS,intron-Distal,intron-Proximal	3.27587	3.75245	K562	BUD13
chr11	76076812	76076896	-	intron-Distal,intron-Proximal	3.47736	3.54718	K562	PRPF8
chr11	76063408	76063442	-	CDS,intron-Distal	3.22117	3.09884	K562	LIN28B
chr11	76063442	76063462	-	CDS,intron-Distal,intron-Proximal	3.79773	3.02060	K562	LIN28B
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 10 entries

eCLIP assay for PRKRIR is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PRKRIR is not available on ENCORE database.
86 RBPs can affect the levels of PRKRIR.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PRKRIR is not available on ENCORE database.

86 RBPs can affect the gene expression of PRKRIR :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PRKRIR	ENSG00000137492.3	410.83670	1531.74600	-1.89850	46.42050	44.34740	HepG2	HNRNPLL
PRKRIR	ENSG00000137492.3	661.18780	1512.73820	-1.19400	19.55960	18.46180	HepG2	SSB
PRKRIR	ENSG00000137492.3	690.44090	1605.06760	-1.21700	19.45260	17.91630	HepG2	GPKOW
PRKRIR	ENSG00000137492.3	1506.75480	2531.65290	-0.74860	12.94570	11.20780	K562	GPKOW
PRKRIR	ENSG00000137492.3	865.93140	1492.99230	-0.78590	10.88700	9.59130	HepG2	TARDBP
PRKRIR	ENSG00000137492.3	3240.16910	2216.74100	0.54750	10.49080	9.36070	K562	RBM15
PRKRIR	ENSG00000137492.3	2453.56060	1623.88050	0.59530	10.35310	8.75750	K562	SYNCRIP
PRKRIR	ENSG00000137492.3	3571.74340	2275.37830	0.65040	8.83700	7.91490	K562	PUS1
PRKRIR	ENSG00000137492.3	1416.26420	975.83270	0.53730	9.18220	7.89110	HepG2	PRPF4
PRKRIR	ENSG00000137492.3	890.48130	1265.00660	-0.50650	8.49330	7.38070	HepG2	UPF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 103 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PRKRIR is not available on ENCORE database.

13 RBPs can affect the splicing of PRKRIR :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PRKRIR	ENSG00000137492.3	chr11	-	76075381	76075476			76071999	76072107	76076895	76077016	0.20500	0.00000	0.01437	included	HepG2	TROVE2
SE	PRKRIR	ENSG00000137492.3	chr11	-	76075381	76075476			76071999	76072107	76076895	76077016	-0.12100	0.00000	0.00000	excluded	K562	PUS1
SE	PRKRIR	ENSG00000137492.3	chr11	-	76075381	76075476			76071999	76072107	76076895	76077016	-0.10500	0.00000	0.00028	excluded	K562	AGGF1
SE	PRKRIR	ENSG00000137492.3	chr11	-	76075381	76075476			76071999	76072107	76076895	76077016	0.26000	0.00000	0.00000	included	K562	HNRNPC
A3SS	PRKRIR	ENSG00000137492.3	chr11	-	76066603	76066808			76066603	76066698	76071999	76072142	0.06500	0.00000	0.00000	longer	K562	AQR
SE	PRKRIR	ENSG00000137492.3	chr11	-	76075381	76075476			76071999	76072107	76076895	76077016	-0.17300	0.00001	0.02479	excluded	K562	EWSR1
SE	PRKRIR	ENSG00000137492.3	chr11	-	76075381	76075476			76071999	76072107	76076895	76077016	-0.09800	0.00002	0.00115	excluded	K562	RBM15
MXE	PRKRIR	ENSG00000137492.3	chr11	-	76071999	76072107	76075381	76075476	76066661	76066698	76076895	76077016	0.15200	0.00010	0.00862	1included	HepG2	DDX3X
SE	PRKRIR	ENSG00000137492.3	chr11	-	76075381	76075476			76071999	76072107	76076895	76077016	0.19800	0.00020	0.02211	included	HepG2	DDX3X
SE	PRKRIR	ENSG00000137492.3	chr11	-	76075381	76075476			76071999	76072107	76076895	76077016	-0.08600	0.00021	0.01040	excluded	K562	UTP18

Showing 1 to 10 of 16 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PRKRIR

General Information

Functions

Localization

Domains (AlphaFold: PRKRIR)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PRKRIR is not avaliable on ENCORE database.

6 proteins are bound to PRKRIR RNA:

eCLIP assay for PRKRIR is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PRKRIR is not available on ENCORE database.

86 RBPs can affect the gene expression of PRKRIR :

The Knockdown/knockout RNA-Seq assay for PRKRIR is not available on ENCORE database.

13 RBPs can affect the splicing of PRKRIR :

The Knockdown/knockout RNA-Seq assay for PRKRIR is not avaliable on ENCORE database.