NR5A1

General Information

Gene Name : NR5A1
Gene ID : ENSG00000136931.9
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NR5A1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NR5A1	ENSG00000136931.9	0.00	0.00	0.00	ENCSR000AEF
HepG2	NR5A1	ENSG00000136931.9	22.81	12.71	17.76	ENCSR985KAT
K562	NR5A1	ENSG00000136931.9	0.01	0.00	0.01	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NR5A1 is not avaliable on ENCORE database.

Proteins bound to RNA

NR5A1 RNA is bound by 27 proteins.

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eCLIP assay for NR5A1 is not avaliable on ENCORE database.

27 proteins are bound to NR5A1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr9	127244688	127244807	-	3'-UTR,intron-Distal	5.94562	34.68339	HepG2	AKAP1
chr9	127244675	127244816	-	3'-UTR,intron-Distal	5.23412	30.65641	HepG2	UPF1
chr9	127262316	127262417	-	CDS,intron-Distal,intron-Proximal	3.58026	25.90978	HepG2	PRPF8
chr9	127243648	127243725	-	3'-UTR,intron-Distal	6.26130	21.10731	HepG2	UPF1
chr9	127243574	127243664	-	3'-UTR,intron-Distal	5.40177	20.78052	HepG2	AKAP1
chr9	127244942	127245001	-	3'-UTR,intron-Distal,intron-Proximal	6.32414	20.22720	HepG2	UPF1
chr9	127244807	127244872	-	3'-UTR,intron-Distal	6.07743	18.04053	HepG2	AKAP1
chr9	127254925	127254981	-	intron-Distal	5.86452	17.19364	HepG2	CSTF2T
chr9	127244180	127244243	-	3'-UTR,intron-Distal	5.05382	16.62638	HepG2	AKAP1
chr9	127244816	127244880	-	3'-UTR,intron-Distal	4.64626	16.62201	HepG2	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 124 entries

eCLIP assay for NR5A1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NR5A1 is not available on ENCORE database.
46 RBPs can affect the levels of NR5A1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NR5A1 is not available on ENCORE database.

46 RBPs can affect the gene expression of NR5A1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NR5A1	ENSG00000136931.5	1534.00360	640.99210	1.25880	28.88470	27.58460	HepG2	TIAL1
NR5A1	ENSG00000136931.5	875.22970	1542.15920	-0.81720	17.90400	16.65610	HepG2	TAF15
NR5A1	ENSG00000136931.5	2285.70490	1019.89720	1.16410	16.48830	14.48780	HepG2	LARP4
NR5A1	ENSG00000136931.5	1652.45370	1061.17290	0.63890	14.46410	13.19300	HepG2	SRSF5
NR5A1	ENSG00000136931.5	1551.33450	1070.03340	0.53580	10.09490	8.91070	HepG2	SRSF7
NR5A1	ENSG00000136931.5	1881.26620	1173.19990	0.68120	9.97810	8.81760	HepG2	RPLP0
NR5A1	ENSG00000136931.5	1557.06840	1089.14770	0.51550	9.33800	8.11830	HepG2	HNRNPF
NR5A1	ENSG00000136931.5	1187.89680	1710.02950	-0.52560	7.95800	6.98270	HepG2	QKI
NR5A1	ENSG00000136931.5	1664.70900	1072.50490	0.63420	7.86050	6.69770	HepG2	IGF2BP1
NR5A1	ENSG00000136931.5	1277.94480	1715.81380	-0.42510	7.17180	6.49390	HepG2	SRSF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 46 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NR5A1 is not available on ENCORE database.

7 RBPs can affect the splicing of NR5A1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	NR5A1	ENSG00000136931.5	chr9	-	127265357	127265499			127262705	127262994	127265572	127265689	0.11600	0.00003	0.00764	included	HepG2	RBFOX2
SE	NR5A1	ENSG00000136931.5	chr9	-	127253359	127253507			127243515	127245284	127262368	127262551	-0.20900	0.00048	0.02692	excluded	HepG2	PCBP1
SE	NR5A1	ENSG00000136931.5	chr9	-	127253359	127253507			127245006	127245284	127262368	127262551	0.09800	0.00102	0.07511	included	HepG2	TBRG4
MXE	NR5A1	ENSG00000136931.5	chr9	-	127262368	127262994	127265357	127265499	127243515	127245284	127265572	127265689	-0.09600	0.00130	0.04424	2included	HepG2	SF3A3
SE	NR5A1	ENSG00000136931.5	chr9	-	127265357	127265499			127262705	127262994	127265572	127265689	0.11300	0.00136	0.01835	included	HepG2	U2AF2
MXE	NR5A1	ENSG00000136931.5	chr9	-	127262368	127262994	127265357	127265499	127255308	127255428	127265572	127265689	0.25200	0.00165	0.01241	1included	HepG2	U2AF2
SE	NR5A1	ENSG00000136931.5	chr9	-	127255308	127255428			127253359	127253507	127262368	127262994	-0.14700	0.00206	0.04814	excluded	HepG2	HNRNPK
SE	NR5A1	ENSG00000136931.5	chr9	-	127262368	127262994			127243515	127245284	127265357	127265499	-0.10700	0.00282	0.06818	excluded	HepG2	SF3A3
MXE	NR5A1	ENSG00000136931.5	chr9	-	127262368	127262994	127265357	127265499	127243515	127245284	127265572	127265689	0.35900	0.00340	0.04885	1included	HepG2	HNRNPUL1
MXE	NR5A1	ENSG00000136931.5	chr9	-	127262368	127262994	127265357	127265499	127255308	127255428	127265572	127265689	0.26600	0.00358	0.04984	1included	HepG2	HNRNPUL1

Showing 1 to 10 of 10 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NR5A1

General Information

Functions

Localization

Domains (AlphaFold: NR5A1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NR5A1 is not avaliable on ENCORE database.

27 proteins are bound to NR5A1 RNA:

eCLIP assay for NR5A1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NR5A1 is not available on ENCORE database.

46 RBPs can affect the gene expression of NR5A1 :

The Knockdown/knockout RNA-Seq assay for NR5A1 is not available on ENCORE database.

7 RBPs can affect the splicing of NR5A1 :

The Knockdown/knockout RNA-Seq assay for NR5A1 is not avaliable on ENCORE database.