NDUFAF5

General Information

Gene Name       : NDUFAF5
Gene ID             : ENSG00000101247.17
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: NDUFAF5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NDUFAF5ENSG00000101247.1724.3216.2520.29ENCSR000AEF
HepG2NDUFAF5ENSG00000101247.1723.8343.9733.90ENCSR985KAT
K562NDUFAF5ENSG00000101247.1714.8213.6614.24ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NDUFAF5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NDUFAF5 RNA is bound by 15 proteins.  







eCLIP assay for NDUFAF5 is not avaliable on ENCORE database.





15 proteins are bound to NDUFAF5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr201379718313797232+3'-UTR,CDS,intron-Distal,intron-Proximal4.5873810.09745HepG2PRPF8
chr201379708213797179+3'-UTR,CDS,intron-Distal,intron-Proximal3.801575.56912HepG2AQR
chr201379832713798404+3'-UTR3.351413.05068HepG2U2AF2
chr201379752013797601+3'-UTR,CDS,intron-Proximal4.551124.67689HepG2PPIG
chr201379756413797604+3'-UTR,CDS,intron-Proximal4.955875.23259HepG2BCLAF1
chr201376570713765824+5'-UTR,CDS5.132154.11950K562DDX3X
chr201376924113769292+CDS3.287864.34695HepG2BCLAF1
chr201376593313766046+CDS,intron-Distal,intron-Proximal5.7561317.48476HepG2EFTUD2
chr201376585113765909+CDS4.428595.14756K562RBM15
chr201376795513768004+CDS,intron-Proximal3.384413.05161HepG2PPIG
chr201376792913768052+CDS,intron-Proximal3.846358.17589HepG2PRPF8
chr201376788513767998+CDS,intron-Proximal5.6672814.80795K562EFTUD2
chr201376924013769295+CDS4.727945.56813HepG2PPIG
chr201376593313765986+CDS,intron-Proximal3.581364.54206HepG2PRPF8
chr201376586113765958+CDS,intron-Proximal3.178493.91443HepG2PPIG
chr201376792713767994+CDS,intron-Proximal4.083525.56912HepG2AQR
chr201377553813775588+CDS,intron-Distal,intron-Proximal3.398693.86355HepG2PPIG
chr201376790413767977+CDS,intron-Proximal5.159486.47067K562SF3B4
chr201376586013765910+CDS3.138083.94979HepG2BCLAF1
chr201379174213791850+intron-Distal5.007685.90029HepG2EXOSC5
chr201377459213774736+intron-Distal4.363005.62258K562KHSRP
chr201378155913781620+intron-Distal3.941274.09469HepG2XPO5
chr201377493913774990+intron-Distal3.937633.64484HepG2HNRNPC
chr201376779513767842+intron-Distal3.579376.17334HepG2U2AF2
chr201376759113767687+intron-Distal4.7819112.54308HepG2QKI
chr201376778113767885+intron-Distal,intron-Proximal6.5245710.29365K562EFTUD2
chr201379048913790527+intron-Distal3.712133.90822HepG2HNRNPM
chr201377394613773992+intron-Distal,intron-Proximal5.185137.53537HepG2U2AF2
chr201379068613790758+intron-Distal3.520005.45871HepG2HNRNPM
chr201376594413766010+intron-Proximal4.699634.65563K562AQR
chr201376788013767945+intron-Proximal4.090386.87873HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NDUFAF5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NDUFAF5 is not available on ENCORE database.

  • 37 RBPs can affect the levels of NDUFAF5.  








The Knockdown/knockout RNA-Seq assay for NDUFAF5 is not available on ENCORE database.





37 RBPs can affect the gene expression of NDUFAF5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NDUFAF5ENSG00000101247.13268.36750363.66080-0.438401.990201.31980HepG2ASCC1
NDUFAF5ENSG00000101247.13410.50600320.014400.359202.372001.74850HepG2CKAP4
NDUFAF5ENSG00000101247.13340.56740242.493900.489902.545401.89170HepG2DDX21
NDUFAF5ENSG00000101247.13653.97750421.018700.635304.681303.88510HepG2DDX3X
NDUFAF5ENSG00000101247.13527.42520384.216800.456902.406801.80930HepG2EIF4A3
NDUFAF5ENSG00000101247.13256.17150346.76970-0.436902.522301.83620HepG2HNRNPF
NDUFAF5ENSG00000101247.13318.62560229.683600.472103.021002.38950HepG2HNRNPU
NDUFAF5ENSG00000101247.13559.08480387.811500.527603.234102.52530HepG2MAGOH
NDUFAF5ENSG00000101247.13384.50280235.644400.706304.489103.48640HepG2PRPF8
NDUFAF5ENSG00000101247.13247.68290401.10700-0.695505.210104.42430HepG2PUF60
NDUFAF5ENSG00000101247.13248.92180326.01930-0.389302.236301.66910HepG2PUS1
NDUFAF5ENSG00000101247.13470.77030253.266000.894304.687103.78220HepG2RAVER1
NDUFAF5ENSG00000101247.13656.17770465.190100.496204.632204.00670HepG2RBM22
NDUFAF5ENSG00000101247.13297.34380390.69530-0.393902.231101.67070HepG2RECQL
NDUFAF5ENSG00000101247.13333.03910233.107200.514602.407001.66880HepG2RRP9
NDUFAF5ENSG00000101247.13489.06680283.983200.784105.347304.39260HepG2SF3A3
NDUFAF5ENSG00000101247.13752.59410525.411800.518306.264105.59360HepG2SRFBP1
NDUFAF5ENSG00000101247.13683.88830409.583300.739509.647708.88550HepG2SRSF1
NDUFAF5ENSG00000101247.13312.72580396.01760-0.340702.063901.51370HepG2SRSF5
NDUFAF5ENSG00000101247.13251.33580333.22840-0.406902.329301.81360HepG2SRSF9
NDUFAF5ENSG00000101247.13284.61910368.18330-0.371401.965301.47890HepG2TAF15
NDUFAF5ENSG00000101247.13522.21100249.597501.0649010.166008.94450HepG2U2AF1
NDUFAF5ENSG00000101247.13359.69440276.986300.376902.375701.85760HepG2ZNF622
NDUFAF5ENSG00000101247.1380.24820155.11790-0.950803.002802.09170K562BOP1
NDUFAF5ENSG00000101247.13142.24320262.60530-0.884503.786402.50920K562CNOT7
NDUFAF5ENSG00000101247.1391.72360164.94320-0.846603.837002.91410K562CPSF6
NDUFAF5ENSG00000101247.13275.63570165.230600.738204.313003.28870K562EIF4A3
NDUFAF5ENSG00000101247.1385.37450157.48690-0.883403.757902.83840K562GPKOW
NDUFAF5ENSG00000101247.13222.22870135.299700.715803.187502.18370K562HNRNPM
NDUFAF5ENSG00000101247.13133.56320239.58300-0.843003.211001.66460K562ILF2
NDUFAF5ENSG00000101247.13232.60620149.752800.635202.394501.58670K562NAA15
NDUFAF5ENSG00000101247.13155.10230252.28590-0.701802.662901.45470K562PABPC1
NDUFAF5ENSG00000101247.1389.96610173.25140-0.945404.231803.20210K562PCBP3
NDUFAF5ENSG00000101247.1366.06640132.88370-1.008204.144203.16110K562POLR2G
NDUFAF5ENSG00000101247.13215.73690148.743300.536301.983401.34180K562PRPF8
NDUFAF5ENSG00000101247.13324.72930425.54020-0.390102.109001.39580K562PUF60
NDUFAF5ENSG00000101247.13339.65820443.48160-0.384802.575101.64650K562PUM2
NDUFAF5ENSG00000101247.13281.91400178.219900.661503.082002.51410K562PUS1
NDUFAF5ENSG00000101247.13279.98080138.538101.014906.604504.76550K562U2AF1
NDUFAF5ENSG00000101247.13233.52230143.089600.706504.033303.06380K562U2AF2
NDUFAF5ENSG00000101247.13330.85810479.88820-0.536503.484901.89310K562UBE2L3
NDUFAF5ENSG00000101247.13132.56840208.38340-0.652503.501602.69960K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NDUFAF5 is not available on ENCORE database.





10 RBPs can affect the splicing of NDUFAF5 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENDUFAF5ENSG00000101247.13chr20+137971081379719213789487137895481379752013797603-0.446000.000000.00000excludedHepG2U2AF1
SENDUFAF5ENSG00000101247.13chr20+137971081379719213789487137895481379752013797603-0.350000.000000.00000excludedHepG2U2AF2
SENDUFAF5ENSG00000101247.13chr20+137679571376799813765595137659361378213113782329-0.135000.010230.08271excludedK562AQR
SENDUFAF5ENSG00000101247.13chr20+1379506313795161137894871378954813797108137971920.285000.000070.00644includedHepG2SFPQ
SENDUFAF5ENSG00000101247.13chr20+137754831377558713773805137738731377910613779146-0.265000.005090.08254excludedK562U2AF1
SENDUFAF5ENSG00000101247.13chr20+1379506313795161137894871378954813797108137971920.201000.000490.06384includedHepG2HNRNPUL1
SENDUFAF5ENSG00000101247.13chr20+1378246313782519137821881378232913789487137895480.296000.000180.04442includedK562SBDS
SENDUFAF5ENSG00000101247.13chr20+1378246313782519137821881378232913789487137895480.083000.000610.04679includedHepG2IGF2BP3
SENDUFAF5ENSG00000101247.13chr20+1379506313795161137894871378954813797108137971920.168000.000920.08721includedHepG2RBFOX2
SENDUFAF5ENSG00000101247.13chr20+137824631378251913782188137823291378948713789548-0.133000.004110.06207excludedK562U2AF2
SENDUFAF5ENSG00000101247.13chr20+137754831377558713773805137738731377910613779146-0.650000.000000.00000excludedK562HNRNPC
A3SSNDUFAF5ENSG00000101247.13chr20+1377380513773873137738251377387313769234137692980.351000.001470.09590longerHepG2SF3A3
A3SSNDUFAF5ENSG00000101247.13chr20+1377380513773873137738251377387313769234137692980.386000.000890.03420longerK562U2AF2
A3SSNDUFAF5ENSG00000101247.13chr20+1379504313795161137950631379516113789487137895480.396000.007450.04102longerK562AQR
A3SSNDUFAF5ENSG00000101247.13chr20+1376782313767998137679571376799813765595137659360.072000.004670.02720longerK562AQR
A3SSNDUFAF5ENSG00000101247.13chr20+1376782313767998137679571376799813765715137659360.419000.000000.00000longerHepG2U2AF1
A3SSNDUFAF5ENSG00000101247.13chr20+1376782313767998137679571376799813765715137659360.284000.000040.00319longerK562U2AF1
MXENDUFAF5ENSG00000101247.13chr20+13773805137738731377910613779146137692341376929813782131137823290.282000.002920.044521includedK562U2AF1
MXENDUFAF5ENSG00000101247.13chr20+13767823137679571376795713767998137655951376593613769234137692980.065000.002700.021441includedK562AQR
MXENDUFAF5ENSG00000101247.13chr20+13773764137738731377548313775587137692341376929813779106137791460.170000.017180.097421includedK562AQR
MXENDUFAF5ENSG00000101247.13chr20+13795043137951611379710813797192137894871378954813797520137976030.203000.000000.000011includedK562AQR
MXENDUFAF5ENSG00000101247.13chr20+13795043137951611379709713797192137894871378954813797520137976030.248000.000000.000031includedK562AQR
MXENDUFAF5ENSG00000101247.13chr20+1377382513773873137754831377558713769234137692981377910613779146-0.240000.003190.079822includedHepG2SF3A3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NDUFAF5 is not avaliable on ENCORE database.