GABARAPL2

General Information

Gene Name : GABARAPL2
Gene ID : ENSG00000034713.7
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: GABARAPL2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	GABARAPL2	ENSG00000034713.7	86.52	73.80	80.16	ENCSR000AEF
HepG2	GABARAPL2	ENSG00000034713.7	60.66	82.88	71.77	ENCSR985KAT
K562	GABARAPL2	ENSG00000034713.7	68.00	59.35	63.67	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for GABARAPL2 is not avaliable on ENCORE database.

Proteins bound to RNA

GABARAPL2 RNA is bound by 17 proteins.

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eCLIP assay for GABARAPL2 is not avaliable on ENCORE database.

17 proteins are bound to GABARAPL2 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	75611258	75611353	+	3'-UTR,CDS	4.40424	40.88642	K562	PUM2
chr16	75600315	75600376	+	5'-UTR	4.58933	22.15910	K562	DDX3X
chr16	75611464	75611528	+	3'-UTR	3.68262	17.62128	K562	TIA1
chr16	75600307	75600373	+	5'-UTR	4.11315	16.64089	HepG2	SUB1
chr16	75600418	75600517	+	5'-UTR,intron-Proximal	4.07872	15.87170	K562	AQR
chr16	75611441	75611516	+	3'-UTR	3.57235	14.73488	HepG2	SUB1
chr16	75600376	75600419	+	5'-UTR,CDS,intron-Proximal	3.35780	12.85699	K562	DDX3X
chr16	75611481	75611521	+	3'-UTR	4.17822	10.83280	HepG2	DDX55
chr16	75611457	75611515	+	3'-UTR	5.34351	9.58469	HepG2	TIAL1
chr16	75611216	75611310	+	3'-UTR,CDS	4.20878	9.14789	K562	RPS3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 32 entries

eCLIP assay for GABARAPL2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for GABARAPL2 is not available on ENCORE database.
83 RBPs can affect the levels of GABARAPL2.

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The Knockdown/knockout RNA-Seq assay for GABARAPL2 is not available on ENCORE database.

83 RBPs can affect the gene expression of GABARAPL2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
GABARAPL2	ENSG00000034713.3	703.44960	2030.78590	-1.52950	44.60470	42.77910	HepG2	SF3B4
GABARAPL2	ENSG00000034713.3	3305.56590	1367.11320	1.27370	31.44280	29.58770	K562	PUS1
GABARAPL2	ENSG00000034713.3	2972.79730	1737.61850	0.77460	28.76640	27.59270	HepG2	SRFBP1
GABARAPL2	ENSG00000034713.3	1320.81980	2021.55720	-0.61400	13.57580	12.36760	HepG2	RECQL
GABARAPL2	ENSG00000034713.3	987.08260	513.67060	0.94220	13.28160	12.10540	HepG2	BOP1
GABARAPL2	ENSG00000034713.3	1326.92280	2170.68540	-0.71010	11.85230	10.88240	HepG2	NELFE
GABARAPL2	ENSG00000034713.3	1283.26210	1916.87640	-0.57890	11.78770	10.67490	HepG2	PCBP1
GABARAPL2	ENSG00000034713.3	1939.00670	1324.88800	0.54930	11.66370	10.59260	K562	AGGF1
GABARAPL2	ENSG00000034713.3	1963.21320	1332.12830	0.55940	9.88340	8.79000	K562	RBM15
GABARAPL2	ENSG00000034713.3	2219.21720	1538.44680	0.52850	9.49960	8.66930	HepG2	RBM22
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 96 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for GABARAPL2 is not available on ENCORE database.

2 RBPs can affect the splicing of GABARAPL2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	GABARAPL2	ENSG00000034713.3	chr16	+	75601934	75602107			75600749	75600805	75611176	75611428	-0.08000	0.00000	0.00000	excluded	K562	SRSF1
A3SS	GABARAPL2	ENSG00000034713.3	chr16	+	75601934	75602107			75601949	75602107	75600749	75600805	-0.10500	0.00000	0.00000	shorter	K562	SF3B4

Showing 1 to 2 of 2 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

GABARAPL2

General Information

Functions

Localization

Domains (AlphaFold: GABARAPL2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for GABARAPL2 is not avaliable on ENCORE database.

17 proteins are bound to GABARAPL2 RNA:

eCLIP assay for GABARAPL2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for GABARAPL2 is not available on ENCORE database.

83 RBPs can affect the gene expression of GABARAPL2 :

The Knockdown/knockout RNA-Seq assay for GABARAPL2 is not available on ENCORE database.

2 RBPs can affect the splicing of GABARAPL2 :

The Knockdown/knockout RNA-Seq assay for GABARAPL2 is not avaliable on ENCORE database.