COG7

General Information

Gene Name : COG7
Gene ID : ENSG00000168434.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: COG7)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	COG7	ENSG00000168434.12	5.17	7.23	6.20	ENCSR000AEF
HepG2	COG7	ENSG00000168434.12	26.09	15.15	20.62	ENCSR985KAT
K562	COG7	ENSG00000168434.12	13.64	11.81	12.73	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for COG7 is not avaliable on ENCORE database.

Proteins bound to RNA

COG7 RNA is bound by 25 proteins.

CanvasJS.com

eCLIP assay for COG7 is not avaliable on ENCORE database.

25 proteins are bound to COG7 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	23424876	23424944	-	CDS,intron-Distal,intron-Proximal	5.40698	20.61996	K562	SF3B4
chr16	23424839	23424888	-	CDS,intron-Distal,intron-Proximal	5.84780	19.19318	K562	U2AF2
chr16	23429993	23430029	-	CDS,intron-Distal,intron-Proximal	5.42202	18.60307	K562	AQR
chr16	23430029	23430039	-	CDS,intron-Distal	6.65757	18.07825	K562	AQR
chr16	23424888	23424907	-	intron-Distal,intron-Proximal	5.73284	17.92188	K562	U2AF2
chr16	23410813	23410916	-	intron-Distal	5.72446	11.34764	HepG2	PRPF4
chr16	23424853	23424904	-	CDS,intron-Distal,intron-Proximal	4.38163	11.12444	HepG2	U2AF2
chr16	23400620	23400713	-	intron-Distal	6.14372	10.98400	K562	EIF4G2
chr16	23428384	23428499	-	CDS,intron-Distal,intron-Proximal	4.18039	10.90247	K562	SF3B4
chr16	23464101	23464129	-	intron-Distal	5.68827	10.48996	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 58 entries

eCLIP assay for COG7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for COG7 is not available on ENCORE database.
53 RBPs can affect the levels of COG7.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for COG7 is not available on ENCORE database.

53 RBPs can affect the gene expression of COG7 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
COG7	ENSG00000168434.8	544.02530	934.86690	-0.78110	12.35530	11.42130	HepG2	RBM22
COG7	ENSG00000168434.8	584.76830	916.77140	-0.64870	10.28850	9.42000	HepG2	SSB
COG7	ENSG00000168434.8	452.00290	747.63590	-0.72600	9.22490	8.29640	HepG2	TAF15
COG7	ENSG00000168434.8	1190.79040	734.78590	0.69640	8.14100	7.25820	K562	PUS1
COG7	ENSG00000168434.8	1118.18400	712.12280	0.65090	8.08940	7.18950	K562	AGGF1
COG7	ENSG00000168434.8	747.61120	495.79110	0.59250	8.14940	7.13060	HepG2	SAFB2
COG7	ENSG00000168434.8	383.04770	654.70550	-0.77330	7.96590	6.89930	HepG2	RPLP0
COG7	ENSG00000168434.8	522.16560	786.49960	-0.59090	7.46090	6.55560	HepG2	UTP3
COG7	ENSG00000168434.8	376.39420	619.89590	-0.71980	7.34570	6.17040	HepG2	CALR
COG7	ENSG00000168434.8	1147.28760	786.35070	0.54490	6.75310	5.32980	K562	KIF1C
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 54 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for COG7 is not available on ENCORE database.

12 RBPs can affect the splicing of COG7 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	COG7	ENSG00000168434.8	chr16	-	23403282	23403555	23400096	23400407	23403700	23403844	0.18700	0.00000	0.00022	included	K562	AKAP8L
SE	COG7	ENSG00000168434.8	chr16	-	23403282	23403555	23400096	23400407	23403700	23403844	0.15800	0.00002	0.00053	included	K562	PUS1
SE	COG7	ENSG00000168434.8	chr16	-	23403282	23403555	23400096	23400407	23403700	23403844	0.16700	0.00006	0.00371	included	K562	UTP18
SE	COG7	ENSG00000168434.8	chr16	-	23403282	23403555	23400096	23400407	23403700	23403844	0.17500	0.00008	0.04699	included	K562	SMNDC1
SE	COG7	ENSG00000168434.8	chr16	-	23403282	23403555	23400096	23400407	23403700	23403844	0.11900	0.00018	0.01133	included	HepG2	HNRNPU
SE	COG7	ENSG00000168434.8	chr16	-	23403282	23403555	23400096	23400407	23403700	23403844	0.11900	0.00019	0.00689	included	HepG2	HNRNPK
SE	COG7	ENSG00000168434.8	chr16	-	23403282	23403555	23400096	23400407	23403700	23403844	0.13400	0.00026	0.00954	included	K562	AGGF1
SE	COG7	ENSG00000168434.8	chr16	-	23403282	23403555	23400096	23400407	23403700	23403844	-0.09600	0.00099	0.01908	excluded	K562	HNRNPC
SE	COG7	ENSG00000168434.8	chr16	-	23403282	23403555	23400096	23400407	23403700	23403844	0.09900	0.00142	0.09707	included	HepG2	DDX6
SE	COG7	ENSG00000168434.8	chr16	-	23403282	23403555	23400096	23400407	23403700	23403844	-0.23200	0.00157	0.05717	excluded	K562	PTBP1

Showing 1 to 10 of 13 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

COG7

General Information

Functions

Localization

Domains (AlphaFold: COG7)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for COG7 is not avaliable on ENCORE database.

25 proteins are bound to COG7 RNA:

eCLIP assay for COG7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for COG7 is not available on ENCORE database.

53 RBPs can affect the gene expression of COG7 :

The Knockdown/knockout RNA-Seq assay for COG7 is not available on ENCORE database.

12 RBPs can affect the splicing of COG7 :

The Knockdown/knockout RNA-Seq assay for COG7 is not avaliable on ENCORE database.