CKMT1A

General Information

Gene Name : CKMT1A
Gene ID : ENSG00000223572.9
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CKMT1A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CKMT1A	ENSG00000223572.9	0.00	0.00	0.00	ENCSR000AEF
HepG2	CKMT1A	ENSG00000223572.9	0.95	0.28	0.61	ENCSR985KAT
K562	CKMT1A	ENSG00000223572.9	5.62	7.20	6.41	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary

RNA Targets

eCLIP assay for CKMT1A is not avaliable on ENCORE database.

Proteins bound to RNA

NO known proteins bind on CKMT1A RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for CKMT1A is not avaliable on ENCORE database.

NO known proteins are bound to CKMT1A RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for CKMT1A is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for CKMT1A is not available on ENCORE database.
74 RBPs can affect the levels of CKMT1A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CKMT1A is not available on ENCORE database.

74 RBPs can affect the gene expression of CKMT1A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CKMT1A	ENSG00000223572.5	16.18890	208.64080	-3.68790	32.75650	29.95800	K562	BOP1
CKMT1A	ENSG00000223572.5	123.96040	355.48320	-1.51990	20.45780	18.84050	K562	DDX47
CKMT1A	ENSG00000223572.5	79.66720	2.38240	5.06340	18.77530	16.33700	HepG2	FASTKD2
CKMT1A	ENSG00000223572.5	90.03430	316.07790	-1.81170	15.71490	14.47190	K562	AQR
CKMT1A	ENSG00000223572.5	103.74780	272.12700	-1.39120	13.78590	12.36590	K562	EIF2S2
CKMT1A	ENSG00000223572.5	46.58780	201.44360	-2.11240	14.55920	12.26540	K562	SF3B1
CKMT1A	ENSG00000223572.5	43.26330	1.56440	4.78930	11.37700	10.34880	HepG2	TRIM56
CKMT1A	ENSG00000223572.5	44.86300	155.96850	-1.79770	12.62190	9.93190	K562	IGF2BP3
CKMT1A	ENSG00000223572.5	315.76510	119.47440	1.40200	11.90760	8.71220	K562	FASTKD2
CKMT1A	ENSG00000223572.5	104.27110	284.60720	-1.44860	11.33820	8.54220	K562	BUD13
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 86 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CKMT1A

General Information

Functions

Localization

Domains (AlphaFold: CKMT1A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CKMT1A is not avaliable on ENCORE database.

NO known proteins are bound to CKMT1A RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for CKMT1A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CKMT1A is not available on ENCORE database.

74 RBPs can affect the gene expression of CKMT1A :

The Knockdown/knockout RNA-Seq assay for CKMT1A is not available on ENCORE database.

No RBPs affect the alternative splcing events of CKMT1A on ENCORE database.

The Knockdown/knockout RNA-Seq assay for CKMT1A is not avaliable on ENCORE database.