ARMCX3

General Information

Gene Name       : ARMCX3
Gene ID             : ENSG00000102401.19
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ARMCX3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ARMCX3ENSG00000102401.1920.2719.9820.12ENCSR000AEF
HepG2ARMCX3ENSG00000102401.1916.3021.3418.82ENCSR985KAT
K562ARMCX3ENSG00000102401.1912.4112.1612.29ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ARMCX3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ARMCX3 RNA is bound by 13 proteins.  







eCLIP assay for ARMCX3 is not avaliable on ENCORE database.





13 proteins are bound to ARMCX3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX100881469100881605+3'-UTR,polyA_site4.7943521.80670K562UPF1
chrX100881903100881977+3'-UTR4.5485817.70314K562UPF1
chrX100879469100879530+3'-UTR,5'-UTR,intron-Proximal3.728133.49944K562FTO
chrX100881809100881903+3'-UTR6.5067918.93283K562UPF1
chrX100882081100882121+3'-UTR3.706348.82905K562UPF1
chrX100882565100882654+3'-UTR4.4980511.65401K562UPF1
chrX100882198100882278+3'-UTR3.6433010.16051K562UPF1
chrX100881100100881211+3'-UTR,CDS4.117574.76534K562PUM2
chrX100881661100881800+3'-UTR6.2703925.37700K562UPF1
chrX100879173100879253+5'-UTR,intron-Distal,intron-Proximal3.467236.04280HepG2PRPF8
chrX100878733100878815+5'-UTR,intron-Proximal4.335783.98427HepG2SF3B4
chrX100878823100878884+5'-UTR,intron-Proximal3.267183.59112HepG2PPIG
chrX100879092100879185+5'-UTR,intron-Distal,intron-Proximal4.684344.92499HepG2AQR
chrX100878171100878249+5'-UTR4.530874.36077HepG2NCBP2
chrX100879147100879209+5'-UTR,intron-Distal,intron-Proximal3.761624.46864HepG2BCLAF1
chrX100879147100879203+5'-UTR,intron-Distal,intron-Proximal4.264313.59941K562UCHL5
chrX100880087100880152+CDS3.437063.69481K562UCHL5
chrX100878516100878672+intron-Distal,intron-Proximal4.550715.81141K562CSTF2T
chrX100879084100879144+intron-Distal,intron-Proximal3.735496.39986K562SF3B4
chrX100878556100878615+intron-Distal3.421644.59965HepG2PRPF4
chrX100878562100878616+intron-Distal3.341503.75245K562BUD13
chrX100878437100878503+intron-Distal,intron-Proximal4.025444.13881HepG2PRPF4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ARMCX3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ARMCX3 is not available on ENCORE database.

  • 96 RBPs can affect the levels of ARMCX3.  








The Knockdown/knockout RNA-Seq assay for ARMCX3 is not available on ENCORE database.





96 RBPs can affect the gene expression of ARMCX3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ARMCX3ENSG00000102401.15758.14750894.91260-0.239302.015001.48120HepG2ACO1
ARMCX3ENSG00000102401.15454.23190677.73230-0.577304.584203.34180HepG2ADAR
ARMCX3ENSG00000102401.151414.799801170.950800.272803.077602.35940HepG2AUH
ARMCX3ENSG00000102401.15880.39790665.921300.402702.496001.64250HepG2BCLAF1
ARMCX3ENSG00000102401.151020.46690643.310000.665503.049002.24200HepG2CALR
ARMCX3ENSG00000102401.15799.455501039.16510-0.378302.484401.74710HepG2CIRBP
ARMCX3ENSG00000102401.151011.64560705.014900.520903.654402.19780HepG2DDX27
ARMCX3ENSG00000102401.151173.95910753.369500.639905.966904.88440HepG2DDX55
ARMCX3ENSG00000102401.15917.13270698.159500.393502.718801.71510HepG2DDX5
ARMCX3ENSG00000102401.15545.60600722.44330-0.405002.343601.49280HepG2EEF2
ARMCX3ENSG00000102401.151316.848401045.757300.332402.109301.58400HepG2EIF2S1
ARMCX3ENSG00000102401.151498.628701109.850600.433203.907802.94940HepG2EIF4G2
ARMCX3ENSG00000102401.15978.039001344.38730-0.459006.409105.55610HepG2ETF1
ARMCX3ENSG00000102401.15883.45510685.873400.365102.619401.50230HepG2FASTKD2
ARMCX3ENSG00000102401.15961.94040627.120600.617105.450703.71630HepG2FKBP4
ARMCX3ENSG00000102401.15364.46270522.17680-0.518803.443802.43210HepG2GEMIN5
ARMCX3ENSG00000102401.151323.94290797.854800.730506.665205.69960HepG2GPKOW
ARMCX3ENSG00000102401.151114.40430761.407200.549403.289202.60910HepG2HNRNPLL
ARMCX3ENSG00000102401.15629.37410761.29150-0.274502.222701.67380HepG2HNRNPU
ARMCX3ENSG00000102401.15686.33750818.07180-0.253302.240501.32090HepG2KIF1C
ARMCX3ENSG00000102401.15857.764101172.82920-0.451302.994502.34080HepG2MATR3
ARMCX3ENSG00000102401.15941.59060702.133500.423303.602502.68130HepG2MSI2
ARMCX3ENSG00000102401.15913.27830675.130400.435803.148702.35140HepG2NSUN2
ARMCX3ENSG00000102401.151626.430801069.287800.605006.048804.99290HepG2PABPC4
ARMCX3ENSG00000102401.151222.703601012.517700.272001.831401.32050HepG2PCBP1
ARMCX3ENSG00000102401.15523.01410679.00900-0.376603.115402.33730HepG2PPIL4
ARMCX3ENSG00000102401.15769.22810605.991600.344003.079002.26880HepG2PRPF4
ARMCX3ENSG00000102401.151837.411101179.164600.6398010.861009.58300HepG2PUM2
ARMCX3ENSG00000102401.151342.434901115.705200.266801.958001.41810HepG2QKI
ARMCX3ENSG00000102401.151655.606301123.663300.559009.318108.49500HepG2RBM22
ARMCX3ENSG00000102401.152047.402101012.656901.015503.523402.76980HepG2RBM25
ARMCX3ENSG00000102401.15564.10480930.74950-0.722403.327202.23330HepG2RBM27
ARMCX3ENSG00000102401.15904.51810575.147500.653105.798504.70250HepG2RRP9
ARMCX3ENSG00000102401.151076.75830677.956400.6673012.9035011.66390HepG2SAFB2
ARMCX3ENSG00000102401.15801.45240572.748600.484603.629502.54660HepG2SERBP1
ARMCX3ENSG00000102401.15947.63740753.644800.330402.079901.46210HepG2SF3B1
ARMCX3ENSG00000102401.151133.37360834.745400.441102.495901.59040HepG2SMNDC1
ARMCX3ENSG00000102401.151568.913301269.144100.305804.143203.56650HepG2SRFBP1
ARMCX3ENSG00000102401.151527.803501119.607700.448404.347703.78740HepG2SRSF1
ARMCX3ENSG00000102401.15542.55770810.91840-0.579803.752102.56720HepG2SRSF3
ARMCX3ENSG00000102401.151080.72390910.925200.246501.770801.31190HepG2SRSF9
ARMCX3ENSG00000102401.151860.663201101.931100.7557021.1671020.03980HepG2SSB
ARMCX3ENSG00000102401.151077.861701248.22340-0.211702.013401.46680HepG2SUCLG1
ARMCX3ENSG00000102401.15873.74370585.809300.576706.081604.71790HepG2SUPT6H
ARMCX3ENSG00000102401.151466.59760750.036100.9673012.9501011.66710HepG2SUPV3L1
ARMCX3ENSG00000102401.151034.25130742.126500.478704.112303.25000HepG2TARDBP
ARMCX3ENSG00000102401.151246.60560924.666200.430902.808201.96620HepG2TIA1
ARMCX3ENSG00000102401.15933.19800739.689900.335202.695602.20030HepG2TIAL1
ARMCX3ENSG00000102401.15845.673601086.00620-0.360902.950702.04500HepG2TUFM
ARMCX3ENSG00000102401.151020.09430742.087600.458903.482402.78260HepG2U2AF1
ARMCX3ENSG00000102401.15615.78470907.01710-0.558707.914906.98580HepG2UTP3
ARMCX3ENSG00000102401.15958.19770598.017000.6800012.4635011.20890HepG2ZC3H8
ARMCX3ENSG00000102401.152427.566001927.626800.332603.889403.23670K562AGGF1
ARMCX3ENSG00000102401.152734.638302118.338600.368303.560902.41050K562AKAP8
ARMCX3ENSG00000102401.153050.090802005.824400.604608.025706.85710K562AKAP8L
ARMCX3ENSG00000102401.151078.381901436.07370-0.413302.530601.34640K562APOBEC3C
ARMCX3ENSG00000102401.151936.616901473.154200.394501.986901.47480K562AQR
ARMCX3ENSG00000102401.152489.566202104.670800.242202.234701.42250K562ATP5C1
ARMCX3ENSG00000102401.15853.54420592.841600.525704.114203.04760K562BOP1
ARMCX3ENSG00000102401.152721.891502002.038700.443002.183801.31890K562CELF1
ARMCX3ENSG00000102401.15558.27930833.48560-0.578206.799205.56380K562EIF3G
ARMCX3ENSG00000102401.15743.40370543.569000.451602.598001.71550K562FTO
ARMCX3ENSG00000102401.151239.05970736.860100.749708.002805.59390K562FUS
ARMCX3ENSG00000102401.15551.763001265.66690-1.1978020.4224018.88880K562FXR1
ARMCX3ENSG00000102401.151174.90270601.900000.964808.846407.41900K562GPKOW
ARMCX3ENSG00000102401.151345.801101057.926100.347102.810502.04960K562GRSF1
ARMCX3ENSG00000102401.151186.71630899.576000.399602.426901.42350K562HNRNPA1
ARMCX3ENSG00000102401.153117.849401793.763000.797504.465802.80410K562HNRNPA2B1
ARMCX3ENSG00000102401.151479.33020777.410000.9281014.5619012.80840K562HSPD1
ARMCX3ENSG00000102401.153110.996402128.536000.547408.689007.01720K562KIF1C
ARMCX3ENSG00000102401.151165.627501492.48950-0.356603.356302.42400K562MAGOH
ARMCX3ENSG00000102401.152504.572302037.650300.297602.639801.59780K562MAK16
ARMCX3ENSG00000102401.151108.20220776.734200.512602.909302.07960K562MTPAP
ARMCX3ENSG00000102401.152852.857001671.387300.771303.370702.37900K562NAA15
ARMCX3ENSG00000102401.151082.76410862.989800.327204.201803.30350K562NSUN2
ARMCX3ENSG00000102401.15880.18230650.971800.435103.357802.43890K562PPIG
ARMCX3ENSG00000102401.15786.60260563.302600.481603.294002.47410K562PRPF8
ARMCX3ENSG00000102401.15839.350901450.01510-0.7887013.7883012.36350K562PTBP1
ARMCX3ENSG00000102401.153880.246701988.931600.9641015.4263014.18400K562PUS1
ARMCX3ENSG00000102401.152114.096301290.252900.712305.000103.00120K562RAVER1
ARMCX3ENSG00000102401.152547.209101938.159400.394104.214903.49940K562RBM15
ARMCX3ENSG00000102401.15990.043701390.62510-0.490204.953103.78840K562RBM22
ARMCX3ENSG00000102401.151647.124801282.266100.361203.482701.97060K562RBM25
ARMCX3ENSG00000102401.151020.860801463.35580-0.519505.064903.53130K562NELFE
ARMCX3ENSG00000102401.15931.12060573.700000.698605.203004.08070K562RPS19
ARMCX3ENSG00000102401.15933.866001512.45210-0.695603.879202.66940K562RPS3
ARMCX3ENSG00000102401.15396.37960548.88400-0.469602.917701.80690K562SAFB
ARMCX3ENSG00000102401.151222.97880851.597800.522102.986302.14180K562SF3A3
ARMCX3ENSG00000102401.152550.209701648.389200.629502.795101.55960K562SNRNP200
ARMCX3ENSG00000102401.15956.323401421.45010-0.571807.452006.30190K562SRSF1
ARMCX3ENSG00000102401.151128.108201460.32530-0.372402.309201.36310K562SRSF4
ARMCX3ENSG00000102401.151045.07600812.621200.362903.448602.13130K562SRSF7
ARMCX3ENSG00000102401.151223.04670752.336300.700906.806904.62210K562SSRP1
ARMCX3ENSG00000102401.15993.92730688.091400.530404.329602.70010K562STAU1
ARMCX3ENSG00000102401.153363.816901972.083400.770303.984002.14000K562SUPT6H
ARMCX3ENSG00000102401.15730.98590545.243000.422802.403801.46030K562SUPV3L1
ARMCX3ENSG00000102401.15969.75010670.683400.531904.600402.68610K562TRIP6
ARMCX3ENSG00000102401.151156.10700918.350700.332103.539802.09550K562TROVE2
ARMCX3ENSG00000102401.151827.986801310.391700.480203.867902.53140K562U2AF1
ARMCX3ENSG00000102401.151713.583601353.521700.340203.505602.60220K562U2AF2
ARMCX3ENSG00000102401.15745.43200915.04890-0.295802.174001.53190K562UPF1
ARMCX3ENSG00000102401.153249.234002016.868600.687903.957602.31620K562UTP18
ARMCX3ENSG00000102401.151122.33520782.974300.519402.487101.65500K562WDR3
ARMCX3ENSG00000102401.152557.875001746.308200.550503.840302.31170K562WRN
ARMCX3ENSG00000102401.153058.121201940.272200.656303.034301.35650K562YTHDC2
ARMCX3ENSG00000102401.152507.118101659.118300.595503.585302.57890K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ARMCX3 is not available on ENCORE database.





3 RBPs can affect the splicing of ARMCX3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXEARMCX3ENSG00000102401.15chrX+1008788031008788831008791471008792081008780781008782661008794691008795400.101000.007840.074071includedK562DROSHA
MXEARMCX3ENSG00000102401.15chrX+100878803100878883100879147100879208100878078100878266100879469100879540-0.130000.000500.011902includedK562PUS1
MXEARMCX3ENSG00000102401.15chrX+100878803100878883100879147100879208100878078100878266100879469100879540-0.149000.010920.097932includedK562U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ARMCX3 is not avaliable on ENCORE database.