ANKMY2

General Information

Gene Name : ANKMY2
Gene ID : ENSG00000106524.8
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ANKMY2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ANKMY2	ENSG00000106524.8	0.23	0.19	0.21	ENCSR000AEF
HepG2	ANKMY2	ENSG00000106524.8	7.39	12.60	9.99	ENCSR985KAT
K562	ANKMY2	ENSG00000106524.8	33.05	32.79	32.92	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project	Note
ANKMY2	Ribo-STAMP-293T	shRNA			BGRSLV03-3,BGRSLV03-4	BGRSLV03-1,BGRSLV03-2		NotSatisfied	ENCORE2
ANKMY2	Ribo-STAMP-293T	shRNA			BGRSLV07-3,BGRSLV07-4	BGRSLV07-1,BGRSLV07-2		NotSatisfied	ENCORE2

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ANKMY2 is not avaliable on ENCORE database.

Proteins bound to RNA

ANKMY2 RNA is bound by 18 proteins.

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eCLIP assay for ANKMY2 is not avaliable on ENCORE database.

18 proteins are bound to ANKMY2 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	16685086	16685126	-	intron-Distal	4.65165	31.35304	K562	AQR
chr7	16685126	16685131	-	intron-Distal	4.55279	23.79145	K562	AQR
chr7	16661632	16661718	-	intron-Distal	5.11841	14.02358	K562	PTBP1
chr7	16685036	16685086	-	intron-Distal	5.33162	13.75908	K562	AQR
chr7	16685082	16685109	-	intron-Distal	4.23107	13.70516	HepG2	PRPF8
chr7	16685109	16685133	-	CDS,intron-Distal	4.47695	11.83008	HepG2	PRPF8
chr7	16644420	16644491	-	CDS,intron-Distal,intron-Proximal	4.33494	11.13098	K562	U2AF2
chr7	16662952	16663042	-	intron-Distal	6.21029	9.36266	K562	QKI
chr7	16666705	16666750	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.91034	8.97367	K562	YBX3
chr7	16660286	16660392	-	intron-Distal	4.19906	7.69621	K562	KHSRP
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 39 entries

eCLIP assay for ANKMY2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ANKMY2 is not available on ENCORE database.
59 RBPs can affect the levels of ANKMY2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ANKMY2 is not available on ENCORE database.

59 RBPs can affect the gene expression of ANKMY2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ANKMY2	ENSG00000106524.4	148.63770	399.11590	-1.42500	14.21020	12.74720	HepG2	HNRNPK
ANKMY2	ENSG00000106524.4	586.08140	279.33080	1.06900	12.50500	11.18540	HepG2	DDX21
ANKMY2	ENSG00000106524.4	732.27100	455.45410	0.68500	9.82770	8.97560	HepG2	SSB
ANKMY2	ENSG00000106524.4	189.40850	427.47390	-1.17430	9.67470	8.55380	HepG2	MATR3
ANKMY2	ENSG00000106524.4	1370.04650	2097.50700	-0.61450	8.39060	7.45810	K562	AQR
ANKMY2	ENSG00000106524.4	251.56190	394.27370	-0.64830	6.08170	5.35340	HepG2	ZNF622
ANKMY2	ENSG00000106524.4	188.64280	342.67470	-0.86120	6.20480	5.35020	HepG2	BOP1
ANKMY2	ENSG00000106524.4	1169.83920	1584.16920	-0.43740	6.13720	4.75330	K562	DKC1
ANKMY2	ENSG00000106524.4	314.31940	478.87420	-0.60740	5.51670	4.67630	HepG2	SRSF5
ANKMY2	ENSG00000106524.4	253.99860	387.28220	-0.60860	5.06870	4.36240	HepG2	SRSF9
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 64 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ANKMY2 is not available on ENCORE database.

14 RBPs can affect the splicing of ANKMY2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ANKMY2	ENSG00000106524.4	chr7	-	16642004	16642134			16639400	16640570	16644345	16644474	-0.07900	0.00000	0.00011	excluded	K562	SF3B4
SE	ANKMY2	ENSG00000106524.4	chr7	-	16684309	16684437			16676015	16676080	16685131	16685441	0.20700	0.00000	0.00030	included	K562	TIA1
SE	ANKMY2	ENSG00000106524.4	chr7	-	16643173	16643285			16642004	16642134	16644345	16644474	0.06800	0.00000	0.00010	included	K562	TARDBP
A3SS	ANKMY2	ENSG00000106524.4	chr7	-	16644345	16644528			16644345	16644474	16649254	16649390	0.11500	0.00000	0.00000	longer	K562	AQR
MXE	ANKMY2	ENSG00000106524.4	chr7	-	16655368	16655529	16664607	16664706	16650173	16650388	16666664	16666803	0.16600	0.00000	0.00009	1included	K562	HNRNPUL1
MXE	ANKMY2	ENSG00000106524.4	chr7	-	16655368	16655529	16664611	16664706	16650173	16650388	16666664	16666803	0.15700	0.00000	0.00017	1included	K562	HNRNPUL1
MXE	ANKMY2	ENSG00000106524.4	chr7	-	16655368	16655484	16664607	16664706	16650173	16650388	16666664	16666803	0.17300	0.00000	0.00004	1included	K562	HNRNPUL1
MXE	ANKMY2	ENSG00000106524.4	chr7	-	16655368	16655484	16664611	16664706	16650173	16650388	16666664	16666803	0.16500	0.00000	0.00007	1included	K562	HNRNPUL1
SE	ANKMY2	ENSG00000106524.4	chr7	-	16642004	16642198			16639400	16640570	16644345	16644474	-0.06900	0.00001	0.00027	excluded	K562	AQR
SE	ANKMY2	ENSG00000106524.4	chr7	-	16684309	16684437			16676015	16676080	16685131	16685441	0.14200	0.00003	0.00297	included	K562	HNRNPK

Showing 1 to 10 of 29 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ANKMY2

General Information

Functions

Localization

Domains (AlphaFold: ANKMY2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ANKMY2 is not avaliable on ENCORE database.

18 proteins are bound to ANKMY2 RNA:

eCLIP assay for ANKMY2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ANKMY2 is not available on ENCORE database.

59 RBPs can affect the gene expression of ANKMY2 :

The Knockdown/knockout RNA-Seq assay for ANKMY2 is not available on ENCORE database.

14 RBPs can affect the splicing of ANKMY2 :

The Knockdown/knockout RNA-Seq assay for ANKMY2 is not avaliable on ENCORE database.