AAMDC

General Information

Gene Name : AAMDC
Gene ID : ENSG00000087884.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: AAMDC)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	AAMDC	ENSG00000087884.14	1.52	5.67	3.59	ENCSR000AEF
HepG2	AAMDC	ENSG00000087884.14	29.31	29.99	29.65	ENCSR985KAT
K562	AAMDC	ENSG00000087884.14	10.04	7.27	8.65	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for AAMDC is not avaliable on ENCORE database.

Proteins bound to RNA

AAMDC RNA is bound by 3 proteins.

CanvasJS.com

eCLIP assay for AAMDC is not avaliable on ENCORE database.

3 proteins are bound to AAMDC RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	77561792	77561939	+	intron-Distal	6.03077	18.41143	K562	HNRNPL
chr11	77561788	77561905	+	intron-Distal	4.29132	16.79879	HepG2	HNRNPL
chr11	77583265	77583383	+	3'-UTR,CDS,intron-Distal	3.67975	4.91517	HepG2	LARP4
chr11	77532193	77532297	+	5'-UTR,intron-Proximal	4.03087	3.33043	HepG2	NCBP2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 4 of 4 entries

eCLIP assay for AAMDC is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for AAMDC is not available on ENCORE database.
50 RBPs can affect the levels of AAMDC.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for AAMDC is not available on ENCORE database.

50 RBPs can affect the gene expression of AAMDC :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
AAMDC	ENSG00000087884.10	499.96080	243.37670	1.03850	15.04680	14.04320	HepG2	SSB
AAMDC	ENSG00000087884.10	273.91300	140.45880	0.96350	7.82230	6.93700	K562	AGGF1
AAMDC	ENSG00000087884.10	295.69070	144.90740	1.02890	7.09920	6.27540	K562	PUS1
AAMDC	ENSG00000087884.10	278.60060	136.70770	1.02700	7.55830	6.18170	HepG2	EWSR1
AAMDC	ENSG00000087884.10	149.61730	315.62030	-1.07690	7.02240	6.05240	HepG2	MATR3
AAMDC	ENSG00000087884.10	142.24720	294.78110	-1.05120	7.11080	6.02840	HepG2	HNRNPK
AAMDC	ENSG00000087884.10	142.27310	302.75770	-1.08950	6.12360	5.13100	HepG2	EIF4B
AAMDC	ENSG00000087884.10	140.25660	245.56680	-0.80800	5.37320	4.57280	HepG2	PCBP1
AAMDC	ENSG00000087884.10	391.89760	248.15990	0.65910	5.07810	4.43000	HepG2	RBM22
AAMDC	ENSG00000087884.10	238.74870	133.84320	0.83480	5.28930	4.40740	HepG2	DKC1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 52 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for AAMDC is not available on ENCORE database.

10 RBPs can affect the splicing of AAMDC :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	AAMDC	ENSG00000087884.10	chr11	+	77566390	77566528	77553524	77553674	77580767	77580863	0.20100	0.00000	0.00000	included	HepG2	HNRNPC
SE	AAMDC	ENSG00000087884.10	chr11	+	77566390	77566528	77553524	77553674	77580767	77580863	0.16600	0.00000	0.00004	included	K562	HNRNPC
SE	AAMDC	ENSG00000087884.10	chr11	+	77566390	77566528	77553502	77553674	77580767	77580863	-0.06800	0.00002	0.00033	excluded	K562	AQR
SE	AAMDC	ENSG00000087884.10	chr11	+	77552064	77552106	77532199	77532287	77553524	77553674	0.25100	0.00002	0.00302	included	HepG2	SRSF9
SE	AAMDC	ENSG00000087884.10	chr11	+	77566390	77566528	77553524	77553674	77580767	77580863	0.05600	0.00013	0.01267	included	HepG2	NCBP2
SE	AAMDC	ENSG00000087884.10	chr11	+	77552064	77552106	77532199	77532287	77553524	77553674	0.24000	0.00031	0.03088	included	HepG2	TBRG4
SE	AAMDC	ENSG00000087884.10	chr11	+	77552064	77552106	77532199	77532287	77553524	77553674	0.25900	0.00082	0.03930	included	HepG2	SFPQ
SE	AAMDC	ENSG00000087884.10	chr11	+	77552064	77552106	77532199	77532287	77553524	77553674	0.20200	0.00107	0.08638	included	HepG2	SUPV3L1
SE	AAMDC	ENSG00000087884.10	chr11	+	77552064	77552106	77532199	77532287	77553524	77553674	0.26800	0.00136	0.08440	included	HepG2	TIAL1
SE	AAMDC	ENSG00000087884.10	chr11	+	77552064	77552106	77532199	77532287	77553524	77553674	-0.21500	0.00250	0.07310	excluded	K562	PRPF8

Showing 1 to 10 of 11 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

AAMDC

General Information

Functions

Localization

Domains (AlphaFold: AAMDC)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for AAMDC is not avaliable on ENCORE database.

3 proteins are bound to AAMDC RNA:

eCLIP assay for AAMDC is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for AAMDC is not available on ENCORE database.

50 RBPs can affect the gene expression of AAMDC :

The Knockdown/knockout RNA-Seq assay for AAMDC is not available on ENCORE database.

10 RBPs can affect the splicing of AAMDC :

The Knockdown/knockout RNA-Seq assay for AAMDC is not avaliable on ENCORE database.