WDPCP

General Information

Gene Name       : WDPCP
Gene ID             : ENSG00000143951.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: WDPCP)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878WDPCPENSG00000143951.152.952.202.58ENCSR000AEF
HepG2WDPCPENSG00000143951.152.022.062.04ENCSR985KAT
K562WDPCPENSG00000143951.152.461.832.15ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for WDPCP is not avaliable on ENCORE database.



Proteins bound to RNA
  • WDPCP RNA is bound by 5 proteins.  







eCLIP assay for WDPCP is not avaliable on ENCORE database.





5 proteins are bound to WDPCP RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr26347891663478927-intron-Distal5.490147.24552K562LSM11
chr26378429463784415-intron-Distal4.708504.80399K562EXOSC5
chr26367408163674166-intron-Distal4.7562211.85119HepG2QKI
chr26367768263677747-intron-Distal4.058413.07980HepG2HNRNPM
chr26374677763746853-intron-Distal4.007023.01445K562EXOSC5
chr26367778463677828-intron-Distal4.118213.59917K562EXOSC5
chr26381520663815288-intron-Distal3.582474.00685K562TIA1
chr26367768463677744-intron-Distal4.705005.31171K562HNRNPM
chr26367791463677996-intron-Distal4.444253.89085K562EXOSC5
chr26378591163785998-intron-Distal4.064763.30687K562EXOSC5
chr26347892763478940-intron-Distal5.490147.24552K562LSM11
chr26367408863674185-intron-Distal7.0329226.65922K562QKI
chr26367774463677809-intron-Distal4.921936.87194K562HNRNPM
chr26378715663787196-intron-Distal4.894496.41304K562EXOSC5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for WDPCP is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for WDPCP is not available on ENCORE database.

  • 16 RBPs can affect the levels of WDPCP.  








The Knockdown/knockout RNA-Seq assay for WDPCP is not available on ENCORE database.





16 RBPs can affect the gene expression of WDPCP :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
WDPCPENSG00000143951.11190.8492089.215701.097004.748304.07510HepG2AKAP1
WDPCPENSG00000143951.11182.6415098.665500.888303.548402.42980HepG2CCAR1
WDPCPENSG00000143951.1133.8092076.60490-1.180003.008102.29480HepG2CPSF6
WDPCPENSG00000143951.1130.3196070.56890-1.218803.002002.38480HepG2EIF2S1
WDPCPENSG00000143951.11102.2249063.111300.695702.106101.56920HepG2HNRNPU
WDPCPENSG00000143951.11146.1727079.163900.884703.016102.36070HepG2MATR3
WDPCPENSG00000143951.1147.67450107.23550-1.169504.296803.57310HepG2PUF60
WDPCPENSG00000143951.1176.47400113.83040-0.573801.910401.39780HepG2PUM1
WDPCPENSG00000143951.11125.5456067.989400.884703.094802.44120HepG2QKI
WDPCPENSG00000143951.11110.3150069.862700.658901.777201.32320HepG2NELFE
WDPCPENSG00000143951.1138.3576070.78490-0.883902.007201.41450HepG2RPLP0
WDPCPENSG00000143951.1140.7059077.63070-0.931402.095001.60040HepG2ZNF622
WDPCPENSG00000143951.1157.37020109.59210-0.933803.229602.58360K562FXR1
WDPCPENSG00000143951.1158.70730110.52340-0.912703.204102.05730K562HNRNPL
WDPCPENSG00000143951.1169.13980113.04720-0.709302.253601.60750K562SRSF1
WDPCPENSG00000143951.1167.96420114.41410-0.751402.446901.77910K562TARDBP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for WDPCP is not available on ENCORE database.






No RBPs affect the alternative splcing events of WDPCP on ENCORE database.





The Knockdown/knockout RNA-Seq assay for WDPCP is not avaliable on ENCORE database.