TTC34

General Information

Gene Name       : TTC34
Gene ID             : ENSG00000215912.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TTC34)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TTC34ENSG00000215912.120.010.030.02ENCSR000AEF
HepG2TTC34ENSG00000215912.120.060.020.04ENCSR985KAT
K562TTC34ENSG00000215912.120.020.020.02ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TTC34 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TTC34 RNA is bound by 3 proteins.  







eCLIP assay for TTC34 is not avaliable on ENCORE database.





3 proteins are bound to TTC34 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr125719352572002-intron-Distal5.2397511.11180HepG2DDX59
chr125734572573527-intron-Distal4.9204011.06567HepG2DDX59
chr125739162573967-intron-Distal4.409655.60609HepG2CSTF2T
chr125737192573767-intron-Distal3.805996.89237HepG2DDX59
chr125745132574598-intron-Distal3.952945.10672HepG2DDX59
chr125720872572188-intron-Distal5.9281225.88609HepG2DDX59
chr125733442573365-intron-Distal,intron-Proximal4.598474.35687HepG2DDX59
chr125723482572441-intron-Distal4.115063.62737K562HNRNPK
chr125736812573762-intron-Distal4.829446.84460HepG2CSTF2T
chr125737682573831-intron-Distal3.905353.44758HepG2CSTF2T
chr125723882572459-intron-Distal6.4697217.76348HepG2DDX59
chr125723712572437-intron-Distal3.824573.31570HepG2HNRNPK
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TTC34 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TTC34 is not available on ENCORE database.

  • 14 RBPs can affect the levels of TTC34.  








The Knockdown/knockout RNA-Seq assay for TTC34 is not available on ENCORE database.





14 RBPs can affect the gene expression of TTC34 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TTC34ENSG00000215912.71.2313010.83370-3.137301.743101.31030HepG2AKAP1
TTC34ENSG00000215912.724.391006.923701.816602.223901.59940HepG2CPSF6
TTC34ENSG00000215912.712.098101.347003.166802.332901.43450HepG2DHX30
TTC34ENSG00000215912.726.010605.204302.321203.043902.33750HepG2DKC1
TTC34ENSG00000215912.712.254901.396803.133002.325801.67500HepG2DNAJC21
TTC34ENSG00000215912.720.585604.417102.220302.520201.94210HepG2ETF1
TTC34ENSG00000215912.714.689701.568303.227502.328901.68800HepG2HNRNPC
TTC34ENSG00000215912.721.344301.557903.776104.638003.87040HepG2HNRNPU
TTC34ENSG00000215912.712.262401.389603.141402.429501.73460HepG2PPIL4
TTC34ENSG00000215912.719.559305.539901.819801.992201.45080HepG2PUS1
TTC34ENSG00000215912.726.504705.594702.244002.574701.61990HepG2RBM27
TTC34ENSG00000215912.727.312703.619602.915604.575003.94910HepG2SSB
TTC34ENSG00000215912.71.4580015.31610-3.393003.193102.61900HepG2ZNF622
TTC34ENSG00000215912.719.812502.062203.264103.277402.63580K562HNRNPC
TTC34ENSG00000215912.79.728900.534504.186002.296101.48040K562HNRNPU
TTC34ENSG00000215912.715.980101.891403.078602.424901.64770K562PCBP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TTC34 is not available on ENCORE database.






No RBPs affect the alternative splcing events of TTC34 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for TTC34 is not avaliable on ENCORE database.