RP11-77K12.1

General Information

Gene Name : RP11-77K12.1
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-77K12.1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-77K12.1 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-77K12.1 RNA is bound by 20 proteins.

eCLIP assay for RP11-77K12.1 is not avaliable on ENCORE database.

20 proteins are bound to RP11-77K12.1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	75498430	75498511	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.40209	5.86838	K562	FTO
chr16	75498451	75498520	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.94930	11.38001	HepG2	DDX3X
chr16	75498535	75498578	-	5'-UTR,intron-Distal,intron-Proximal	5.26020	4.57565	HepG2	DDX3X
chr16	75446435	75446629	-	CDS,intron-Distal,intron-Proximal	4.37982	15.62408	K562	ZNF622
chr16	75448501	75448517	-	CDS,intron-Distal,intron-Proximal	3.14495	3.39306	HepG2	GRWD1
chr16	75446608	75446653	-	CDS,intron-Distal,intron-Proximal	3.99685	9.52225	K562	UCHL5
chr16	75498319	75498375	-	CDS,intron-Distal,intron-Proximal	4.04529	6.34662	HepG2	PRPF8
chr16	75446470	75446603	-	CDS,intron-Distal,intron-Proximal	3.46558	5.94696	HepG2	ZNF800
chr16	75448504	75448569	-	CDS,intron-Distal,intron-Proximal	3.51306	10.33341	K562	UCHL5
chr16	75446526	75446648	-	CDS,intron-Distal,intron-Proximal	5.00279	4.86986	HepG2	FXR2
chr16	75448475	75448504	-	CDS,intron-Distal,intron-Proximal	3.90984	8.61219	K562	UCHL5
chr16	75448571	75448593	-	CDS,intron-Distal	4.01306	5.77244	K562	UCHL5
chr16	75446520	75446608	-	CDS,intron-Distal,intron-Proximal	4.89583	17.00912	K562	UCHL5
chr16	75446623	75446652	-	CDS,intron-Distal	4.13362	3.22063	K562	TRA2A
chr16	75446530	75446585	-	CDS,intron-Distal,intron-Proximal	4.26162	9.80976	HepG2	BCLAF1
chr16	75448494	75448594	-	CDS,intron-Distal,intron-Proximal	4.09840	10.40438	K562	ZNF622
chr16	75448517	75448564	-	CDS,intron-Distal,intron-Proximal	4.83816	6.73025	HepG2	GRWD1
chr16	75446609	75446651	-	CDS,intron-Distal	3.65084	8.66838	HepG2	BCLAF1
chr16	75446529	75446656	-	CDS,intron-Distal,intron-Proximal	3.05131	4.60355	HepG2	SRSF1
chr16	75448473	75448556	-	CDS,intron-Distal,intron-Proximal	3.39331	3.31144	K562	TRA2A
chr16	75448478	75448494	-	CDS,intron-Distal,intron-Proximal	3.22509	4.34695	HepG2	BCLAF1
chr16	75477879	75477921	-	3'-UTR,intron-Distal	3.31063	3.07801	K562	UPF1
chr16	75467185	75467257	-	5'-UTR,CDS,intron-Distal	3.58045	8.10543	K562	UCHL5
chr16	75467238	75467278	-	5'-UTR,CDS,intron-Distal	3.58513	5.80880	HepG2	GRWD1
chr16	75481133	75481203	-	3'-UTR,intron-Distal,intron-Proximal	3.42852	3.80864	K562	FAM120A
chr16	75446431	75446526	-	CDS,intron-Distal,intron-Proximal	4.11847	12.38345	HepG2	BCLAF1
chr16	75467276	75467322	-	5'-UTR,intron-Distal,intron-Proximal	5.50787	6.75419	HepG2	DDX3X
chr16	75480022	75480081	-	3'-UTR,intron-Distal	3.23683	3.05408	HepG2	UPF1
chr16	75467235	75467324	-	5'-UTR,CDS,intron-Distal,intron-Proximal	6.90991	16.86373	K562	DDX3X
chr16	75498151	75498204	-	5'-UTR,intron-Distal	4.66991	6.05264	HepG2	DDX3X
chr16	75466792	75466835	-	intron-Distal	3.93656	3.51664	K562	RBM15
chr16	75446431	75446522	-	CDS,intron-Distal,intron-Proximal	3.26422	4.38893	K562	ZNF800
chr16	75481163	75481217	-	3'-UTR,intron-Distal,intron-Proximal	3.90925	5.53561	K562	PUM2
chr16	75479254	75479345	-	3'-UTR,intron-Distal	4.46369	8.55453	HepG2	UPF1
chr16	75462525	75462577	-	intron-Distal	4.95082	4.40618	K562	PTBP1
chr16	75446431	75446520	-	CDS,intron-Distal,intron-Proximal	4.59367	17.13945	K562	UCHL5
chr16	75467182	75467238	-	5'-UTR,CDS,intron-Distal	4.73114	14.93512	HepG2	GRWD1
chr16	75467106	75467158	-	intron-Distal	5.43190	5.83705	HepG2	RBM22
chr16	75446445	75446570	-	CDS,intron-Distal,intron-Proximal	3.90489	4.25505	HepG2	UCHL5
chr16	75462518	75462571	-	intron-Distal	4.20346	7.55717	HepG2	PTBP1
chr16	75477437	75477484	-	3'-UTR,intron-Distal	3.20886	3.37074	K562	TIA1
chr16	75481217	75481259	-	3'-UTR,intron-Distal	5.67754	3.68551	K562	PUM2
chr16	75484772	75484867	-	intron-Distal	3.73764	5.50447	HepG2	ILF3
chr16	75467322	75467368	-	5'-UTR,intron-Distal,intron-Proximal	4.31840	6.30673	HepG2	DDX3X
chr16	75481529	75481600	-	CDS,intron-Distal,intron-Proximal	4.11637	6.58004	HepG2	U2AF2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-77K12.1 is not avaliable on ENCORE database.

Summary

Diffrential Expression

The Knockdown/knockout assay for RP11-77K12.1 is not available on ENCORE database.
No RBPs affect the gene expression of RP11-77K12.1 on ENCORE database.

RP11-77K12.1

General Information

Functions

Localization

Domains (AlphaFold: RP11-77K12.1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-77K12.1 is not avaliable on ENCORE database.

20 proteins are bound to RP11-77K12.1 RNA:

eCLIP assay for RP11-77K12.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-77K12.1 is not available on ENCORE database.

No RBPs affect the gene expression of RP11-77K12.1 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-77K12.1 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP11-77K12.1 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-77K12.1 is not avaliable on ENCORE database.