RP11-412P11.1

General Information

Gene Name : RP11-412P11.1
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-412P11.1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-412P11.1 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-412P11.1 RNA is bound by 4 proteins.

eCLIP assay for RP11-412P11.1 is not avaliable on ENCORE database.

4 proteins are bound to RP11-412P11.1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr4	23012278	23012324	+	intron-Distal	3.78995	3.69885	K562	KHDRBS1
chr4	23020574	23020719	+	intron-Distal	5.03740	4.38664	K562	QKI
chr4	23012152	23012194	+	intron-Distal	3.76775	3.46942	K562	KHDRBS1
chr4	23008345	23008494	+	intron-Distal	3.01098	3.67498	K562	SAFB2
chr4	23011849	23011916	+	intron-Distal	4.28995	4.66738	K562	KHDRBS1
chr4	23012499	23012554	+	intron-Distal	4.25257	5.31406	K562	KHDRBS1
chr4	23011205	23011265	+	intron-Distal	4.41353	6.19082	K562	KHDRBS1
chr4	23014041	23014135	+	intron-Distal	3.22652	6.67781	K562	KHDRBS1
chr4	23013974	23014027	+	intron-Distal	4.26020	5.09407	K562	KHDRBS1
chr4	22999493	22999577	+	intron-Distal	3.28657	6.04536	K562	KHSRP
chr4	22999429	22999493	+	intron-Distal	4.01278	3.92684	K562	KHSRP
chr4	23011423	23011461	+	intron-Distal	3.69175	3.39089	K562	KHDRBS1
chr4	23012965	23013043	+	intron-Distal	3.84567	7.68161	K562	KHDRBS1
chr4	23015218	23015311	+	intron-Distal	3.73428	3.19638	K562	SAFB2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-412P11.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-412P11.1 is not available on ENCORE database.
9 RBPs can affect the levels of RP11-412P11.1.

The Knockdown/knockout RNA-Seq assay for RP11-412P11.1 is not available on ENCORE database.

9 RBPs can affect the gene expression of RP11-412P11.1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-412P11.1	ENSG00000248837.1	87.75270	41.17700	1.09150	2.71930	1.67180	K562	CNOT7
RP11-412P11.1	ENSG00000248837.1	242.84550	159.67380	0.60480	2.60810	1.66130	K562	CELF1
RP11-412P11.1	ENSG00000248837.1	141.21110	90.55340	0.64090	1.97220	1.38780	K562	G3BP2
RP11-412P11.1	ENSG00000248837.1	135.77000	67.44190	1.00930	4.62800	3.46750	K562	HNRNPU
RP11-412P11.1	ENSG00000248837.1	144.56560	92.06280	0.65090	2.43720	1.57710	K562	MATR3
RP11-412P11.1	ENSG00000248837.1	48.33140	85.94140	-0.83040	2.38480	1.60950	K562	RBM22
RP11-412P11.1	ENSG00000248837.1	47.68180	90.43950	-0.92350	2.89580	1.77410	K562	NELFE
RP11-412P11.1	ENSG00000248837.1	105.96780	52.24700	1.02010	3.84780	2.81010	K562	WDR3
RP11-412P11.1	ENSG00000248837.1	200.50570	137.60400	0.54300	2.30270	1.52760	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-412P11.1 is not available on ENCORE database.

1 RBPs can affect the splicing of RP11-412P11.1 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	RP11-412P11.1	ENSG00000248837.1	chr4	+	23042312	23042405			23004772	23004866	23057461	23058485	0.56700	0.00477	0.07139	included	K562	SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-412P11.1

General Information

Functions

Localization

Domains (AlphaFold: RP11-412P11.1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-412P11.1 is not avaliable on ENCORE database.

4 proteins are bound to RP11-412P11.1 RNA:

eCLIP assay for RP11-412P11.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-412P11.1 is not available on ENCORE database.

9 RBPs can affect the gene expression of RP11-412P11.1 :

The Knockdown/knockout RNA-Seq assay for RP11-412P11.1 is not available on ENCORE database.

1 RBPs can affect the splicing of RP11-412P11.1 :

The Knockdown/knockout RNA-Seq assay for RP11-412P11.1 is not avaliable on ENCORE database.