RP11-38L15.2

General Information

Gene Name       : RP11-38L15.2
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-38L15.2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-38L15.2 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on RP11-38L15.2 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for RP11-38L15.2 is not avaliable on ENCORE database.






NO known proteins are bound to RP11-38L15.2 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for RP11-38L15.2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-38L15.2 is not available on ENCORE database.

  • 15 RBPs can affect the levels of RP11-38L15.2.  








The Knockdown/knockout RNA-Seq assay for RP11-38L15.2 is not available on ENCORE database.





15 RBPs can affect the gene expression of RP11-38L15.2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-38L15.2ENSG00000229227.438.322106.627102.531604.755703.73770HepG2ASCC1
RP11-38L15.2ENSG00000229227.454.440006.295303.112208.235706.95880HepG2CIRBP
RP11-38L15.2ENSG00000229227.431.730905.208102.607003.625002.86810HepG2DKC1
RP11-38L15.2ENSG00000229227.420.686102.292003.173903.645702.42600HepG2EIF3G
RP11-38L15.2ENSG00000229227.415.765201.426603.466002.799602.14900HepG2HNRNPA1
RP11-38L15.2ENSG00000229227.423.284806.613601.815801.965601.37000HepG2HNRNPK
RP11-38L15.2ENSG00000229227.428.841804.575502.656102.490101.32930HepG2PRPF6
RP11-38L15.2ENSG00000229227.413.384301.755002.930902.157401.38750HepG2RBM15
RP11-38L15.2ENSG00000229227.453.7550011.283102.252104.766004.09080HepG2NELFE
RP11-38L15.2ENSG00000229227.430.1341010.505101.520201.986501.45190HepG2RECQL
RP11-38L15.2ENSG00000229227.418.277303.087602.565402.211401.51700HepG2SNRNP70
RP11-38L15.2ENSG00000229227.423.844205.897302.015402.669102.16200HepG2SSB
RP11-38L15.2ENSG00000229227.426.967704.818402.484503.007802.30620HepG2SUPV3L1
RP11-38L15.2ENSG00000229227.443.020709.898902.119604.378503.69720HepG2TAF15
RP11-38L15.2ENSG00000229227.438.338004.743103.014805.130104.15070HepG2XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-38L15.2 is not available on ENCORE database.





1 RBPs can affect the splicing of RP11-38L15.2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERP11-38L15.2ENSG00000229227.4chr10-4694036146940525469376584693770846941847469418900.188000.001090.09133includedHepG2TAF15

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RP11-38L15.2 is not avaliable on ENCORE database.