PLAC1

General Information

Gene Name       : PLAC1
Gene ID             : ENSG00000170965.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PLAC1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PLAC1ENSG00000170965.90.210.010.11ENCSR000AEF
HepG2PLAC1ENSG00000170965.91.511.471.49ENCSR985KAT
K562PLAC1ENSG00000170965.91.731.671.70ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PLAC1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on PLAC1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for PLAC1 is not avaliable on ENCORE database.






NO known proteins are bound to PLAC1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for PLAC1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PLAC1 is not available on ENCORE database.

  • 24 RBPs can affect the levels of PLAC1.  








The Knockdown/knockout RNA-Seq assay for PLAC1 is not available on ENCORE database.





24 RBPs can affect the gene expression of PLAC1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PLAC1ENSG00000170965.5117.9457015.128202.9627012.9341011.87180HepG2AKAP1
PLAC1ENSG00000170965.562.0335012.517802.309006.463205.28590HepG2ASCC1
PLAC1ENSG00000170965.538.5151012.844001.584202.263201.41980HepG2BCCIP
PLAC1ENSG00000170965.535.4403011.892601.575202.437401.70730HepG2CIRBP
PLAC1ENSG00000170965.538.8769014.150201.458002.737402.07500HepG2CKAP4
PLAC1ENSG00000170965.5111.3692016.865502.7231011.6552010.12460HepG2CNOT7
PLAC1ENSG00000170965.558.5998025.354501.208603.195202.40830HepG2DAZAP1
PLAC1ENSG00000170965.597.2862014.492702.7468011.2465010.06340HepG2DDX3X
PLAC1ENSG00000170965.536.5629011.968101.611102.496401.93200HepG2EIF2S1
PLAC1ENSG00000170965.543.8900013.830301.666003.462902.52600HepG2EWSR1
PLAC1ENSG00000170965.552.5875012.378802.086805.188404.29020HepG2G3BP1
PLAC1ENSG00000170965.551.3881015.611901.718703.800702.49330HepG2GRSF1
PLAC1ENSG00000170965.551.0366012.530202.026004.386903.52390HepG2HNRNPK
PLAC1ENSG00000170965.540.5238017.080701.246301.908701.39620HepG2HNRNPU
PLAC1ENSG00000170965.542.863708.851902.275604.392003.33870HepG2LARP4
PLAC1ENSG00000170965.531.4807012.237501.363101.917501.30740HepG2PABPC4
PLAC1ENSG00000170965.554.8037022.775401.266702.846302.23400HepG2PCBP1
PLAC1ENSG00000170965.552.4787024.001001.128502.359901.80300HepG2PUF60
PLAC1ENSG00000170965.544.5287019.245401.210102.238201.35530HepG2RBM27
PLAC1ENSG00000170965.528.864508.551101.755002.384801.80950HepG2RPS19
PLAC1ENSG00000170965.538.5492015.046101.357202.516801.60610HepG2SMNDC1
PLAC1ENSG00000170965.532.990409.118701.855003.144502.03620HepG2UTP18
PLAC1ENSG00000170965.593.8076022.080702.086807.056805.84060K562GRSF1
PLAC1ENSG00000170965.529.013406.241502.216603.459202.55850K562MTPAP
PLAC1ENSG00000170965.537.594408.827402.090403.992802.79920K562RCC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PLAC1 is not available on ENCORE database.





1 RBPs can affect the splicing of PLAC1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPLAC1ENSG00000170965.5chrX-1337360801337361521337005391337007701338982631338982930.471000.001120.07590includedHepG2DDX3X

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PLAC1 is not avaliable on ENCORE database.