LL0XNC01-237H1.2

General Information

Gene Name       : LL0XNC01-237H1.2
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LL0XNC01-237H1.2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LL0XNC01-237H1.2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • LL0XNC01-237H1.2 RNA is bound by 3 proteins.  







eCLIP assay for LL0XNC01-237H1.2 is not avaliable on ENCORE database.





3 proteins are bound to LL0XNC01-237H1.2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX102143748102143856+intron-Distal4.839647.92611K562ILF3
chrX102142771102142855+intron-Distal4.359443.44037HepG2DDX59
chrX102142777102142895+intron-Distal5.5342717.15912HepG2PCBP2
chrX102142786102142917+intron-Distal5.169589.77775K562ILF3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LL0XNC01-237H1.2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LL0XNC01-237H1.2 is not available on ENCORE database.

  • 17 RBPs can affect the levels of LL0XNC01-237H1.2.  








The Knockdown/knockout RNA-Seq assay for LL0XNC01-237H1.2 is not available on ENCORE database.





17 RBPs can affect the gene expression of LL0XNC01-237H1.2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LL0XNC01-237H1.2ENSG00000239407.110.0349057.53210-2.519306.922906.08350K562AGGF1
LL0XNC01-237H1.2ENSG00000239407.118.4258063.20300-1.778305.129703.69220K562AKAP8
LL0XNC01-237H1.2ENSG00000239407.19.0289059.86080-2.729007.630906.49760K562AKAP8L
LL0XNC01-237H1.2ENSG00000239407.120.3841062.80090-1.623303.555202.50800K562ATP5C1
LL0XNC01-237H1.2ENSG00000239407.131.1497068.76680-1.142503.296201.99370K562CCDC124
LL0XNC01-237H1.2ENSG00000239407.157.70900108.06660-0.905102.428401.44370K562CNOT7
LL0XNC01-237H1.2ENSG00000239407.121.7381064.43920-1.567704.063202.97330K562DKC1
LL0XNC01-237H1.2ENSG00000239407.139.6419016.675001.249202.180901.44850K562EIF4A3
LL0XNC01-237H1.2ENSG00000239407.115.7336077.92940-2.308302.597401.42720K562HNRNPA2B1
LL0XNC01-237H1.2ENSG00000239407.116.4578063.54110-1.948904.916203.75730K562KIF1C
LL0XNC01-237H1.2ENSG00000239407.115.8522060.81320-1.939704.676303.17080K562MAK16
LL0XNC01-237H1.2ENSG00000239407.120.5704071.18010-1.790904.485003.27240K562MBNL1
LL0XNC01-237H1.2ENSG00000239407.18.0018049.89090-2.640405.410504.03330K562NAA15
LL0XNC01-237H1.2ENSG00000239407.111.8524068.24260-2.525502.649801.68340K562PABPN1
LL0XNC01-237H1.2ENSG00000239407.18.4894059.39360-2.806607.439906.59560K562PUS1
LL0XNC01-237H1.2ENSG00000239407.18.7327057.84680-2.727707.518306.57050K562RBM15
LL0XNC01-237H1.2ENSG00000239407.116.7863060.19050-1.842204.453602.67110K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LL0XNC01-237H1.2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of LL0XNC01-237H1.2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for LL0XNC01-237H1.2 is not avaliable on ENCORE database.