LAMTOR5-AS1

General Information

Gene Name       : LAMTOR5-AS1
Gene ID             : ENSG00000224699.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LAMTOR5-AS1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LAMTOR5-AS1ENSG00000224699.83.634.764.20ENCSR000AEF
HepG2LAMTOR5-AS1ENSG00000224699.81.992.032.01ENCSR985KAT
K562LAMTOR5-AS1ENSG00000224699.85.635.125.38ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LAMTOR5-AS1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on LAMTOR5-AS1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for LAMTOR5-AS1 is not avaliable on ENCORE database.






NO known proteins are bound to LAMTOR5-AS1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for LAMTOR5-AS1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LAMTOR5-AS1 is not available on ENCORE database.

  • 15 RBPs can affect the levels of LAMTOR5-AS1.  








The Knockdown/knockout RNA-Seq assay for LAMTOR5-AS1 is not available on ENCORE database.





15 RBPs can affect the gene expression of LAMTOR5-AS1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LAMTOR5-AS1ENSG00000224699.434.981503.759303.217905.719204.80100HepG2EIF4A3
LAMTOR5-AS1ENSG00000224699.419.982303.515302.506902.781502.11470HepG2G3BP1
LAMTOR5-AS1ENSG00000224699.428.365804.723702.586103.414202.65060HepG2HNRNPC
LAMTOR5-AS1ENSG00000224699.417.951003.786102.245202.099101.52430HepG2MAGOH
LAMTOR5-AS1ENSG00000224699.426.2975068.89840-1.389503.797303.15120K562AGGF1
LAMTOR5-AS1ENSG00000224699.428.4409071.68900-1.333803.853803.08080K562AKAP8L
LAMTOR5-AS1ENSG00000224699.441.0064075.21340-0.875102.416501.56750K562ATP5C1
LAMTOR5-AS1ENSG00000224699.485.5909028.516801.585505.068604.28300K562HNRNPC
LAMTOR5-AS1ENSG00000224699.437.3867076.09030-1.025202.609401.81140K562KIF1C
LAMTOR5-AS1ENSG00000224699.444.4134085.23890-0.940502.850501.92390K562MBNL1
LAMTOR5-AS1ENSG00000224699.497.6067044.349201.138003.437102.50890K562PCBP3
LAMTOR5-AS1ENSG00000224699.475.3684034.018201.147603.227202.35780K562POLR2G
LAMTOR5-AS1ENSG00000224699.420.6225071.11690-1.786005.071904.36490K562PUS1
LAMTOR5-AS1ENSG00000224699.428.0498069.27520-1.304303.561602.90230K562RBM15
LAMTOR5-AS1ENSG00000224699.468.4737033.009901.052602.765101.67340K562NELFE
LAMTOR5-AS1ENSG00000224699.411.1842032.07600-1.520002.156101.52330K562SRSF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LAMTOR5-AS1 is not available on ENCORE database.





1 RBPs can affect the splicing of LAMTOR5-AS1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SELAMTOR5-AS1ENSG00000224699.4chr1+1109559421109560321109547941109549151109567731109568530.552000.000420.00824includedK562PUS1
MXELAMTOR5-AS1ENSG00000224699.4chr1+1109559421109560321109567731109568531109547941109549151109586301109588100.343000.007510.092731includedK562PUS1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for LAMTOR5-AS1 is not avaliable on ENCORE database.