GFAP

General Information

Gene Name       : GFAP
Gene ID             : ENSG00000131095.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GFAP)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GFAPENSG00000131095.120.000.000.00ENCSR000AEF
HepG2GFAPENSG00000131095.120.040.120.08ENCSR985KAT
K562GFAPENSG00000131095.120.690.390.54ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GFAP is not avaliable on ENCORE database.



Proteins bound to RNA
  • GFAP RNA is bound by 1 proteins.  







eCLIP assay for GFAP is not avaliable on ENCORE database.





1 proteins are bound to GFAP RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr174299388542993891-intron-Distal11.0868192.32062K562UTP3
chr174299390142993908-intron-Distal11.0868192.32062K562UTP3
chr174299389142993901-intron-Distal11.0868192.32062K562UTP3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GFAP is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GFAP is not available on ENCORE database.

  • 11 RBPs can affect the levels of GFAP.  








The Knockdown/knockout RNA-Seq assay for GFAP is not available on ENCORE database.





11 RBPs can affect the gene expression of GFAP :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GFAPENSG00000131095.718.173500.991504.196003.862203.16850HepG2EIF2S1
GFAPENSG00000131095.746.9757015.579001.592203.159102.32030K562CPSF6
GFAPENSG00000131095.789.6956038.059701.236704.098402.90120K562CELF1
GFAPENSG00000131095.748.4099020.206601.260402.713401.46170K562EXOSC5
GFAPENSG00000131095.739.1351015.855801.303302.040801.30260K562FMR1
GFAPENSG00000131095.7100.3781033.019201.604006.474104.76140K562MSI2
GFAPENSG00000131095.746.0241018.243201.334902.030301.33140K562PPIG
GFAPENSG00000131095.74.8750019.77440-2.020202.122001.40150K562SYNCRIP
GFAPENSG00000131095.774.8212028.752201.379704.018102.48500K562TROVE2
GFAPENSG00000131095.746.5618015.841801.555302.971701.90880K562UCHL5
GFAPENSG00000131095.770.7849028.547501.310003.951102.88760K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GFAP is not available on ENCORE database.






No RBPs affect the alternative splcing events of GFAP on ENCORE database.





The Knockdown/knockout RNA-Seq assay for GFAP is not avaliable on ENCORE database.