CTD-2374C24.1

General Information

Gene Name       : CTD-2374C24.1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CTD-2374C24.1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CTD-2374C24.1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CTD-2374C24.1 RNA is bound by 13 proteins.  







eCLIP assay for CTD-2374C24.1 is not avaliable on ENCORE database.





13 proteins are bound to CTD-2374C24.1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5104537331104537357-intron-Distal4.249733.59909K562EXOSC5
chr5104536094104536167-intron-Distal4.677545.44508K562EXOSC5
chr5104562755104562902-intron-Distal3.910713.24603K562KHSRP
chr5104490795104490850-intron-Distal5.4945212.44694K562TARDBP
chr5104508396104508496-intron-Distal4.439385.08344K562TARDBP
chr5104334105104334182-intron-Distal3.914364.12694HepG2CSTF2
chr5104489228104489312-intron-Distal3.123953.36168K562SAFB2
chr5104570525104570625-intron-Distal3.533734.70430K562CSTF2T
chr5104557226104557269-intron-Distal4.422064.48623K562EXOSC5
chr5104440739104440872-intron-Distal5.042516.12104HepG2QKI
chr5104490679104490732-intron-Distal3.485934.60942K562TARDBP
chr5104516659104516806-intron-Distal3.485556.59733K562KHSRP
chr5104440689104440834-intron-Distal3.893084.69074K562PTBP1
chr5104328069104328166-intron-Distal4.888626.23638HepG2QKI
chr5104516572104516635-intron-Distal4.070523.66668K562KHSRP
chr5104508270104508359-intron-Distal4.253964.85626K562TARDBP
chr5104362147104362305-intron-Distal4.330573.89294K562KHSRP
chr5104556145104556202-intron-Distal3.876373.49896K562KHDRBS1
chr5104380386104380450-intron-Distal4.116193.88340K562TARDBP
chr5104556957104557047-intron-Distal4.289354.27660K562HNRNPL
chr5104350055104350203-intron-Distal3.353693.68839K562KHSRP
chr5104276661104276759-intron-Distal6.5055716.14543K562PTBP1
chr5104335972104336039-intron-Distal3.714923.37631K562HNRNPL
chr5104500780104500853-intron-Distal3.878953.87596K562KHDRBS1
chr5104533505104533634-intron-Distal3.034594.33816K562HNRNPL
chr5104354891104354983-intron-Distal5.439647.41017K562PTBP1
chr5104490592104490656-intron-Distal3.509584.38938K562TARDBP
chr5104276668104276782-intron-Distal4.520073.78533HepG2PTBP1
chr5104490827104490906-intron-Distal3.453963.47685K562EIF4G2
chr5104490965104491067-intron-Distal5.4401812.64183K562TARDBP
chr5104487774104487856-intron-Distal4.461474.56270K562SAFB2
chr5104540282104540349-intron-Distal3.723513.24603K562KHSRP
chr5104485459104485531-intron-Distal4.140924.48810K562SAFB2
chr5104537388104537431-intron-Distal4.064763.30696K562EXOSC5
chr5104490904104490956-intron-Distal4.888327.67146K562TARDBP
chr5104490850104490904-intron-Distal5.6504913.38631K562TARDBP
chr5104490961104491057-intron-Distal3.570024.98417K562EIF4G2
chr5104540388104540441-intron-Distal3.779173.14791K562HNRNPL
chr5104533889104533998-intron-Distal3.830506.49713K562KHDRBS1
chr5104385044104385137-intron-Distal3.097193.46712K562SAFB2
chr5104434282104434358-intron-Distal4.120377.80454K562PTBP1
chr5104431096104431170-intron-Distal3.643533.43875K562EXOSC5
chr5104516449104516519-intron-Distal3.170303.93901K562KHSRP
chr5104465659104465755-intron-Distal4.499735.58061HepG2SUGP2
chr5104335964104336039-intron-Distal4.124223.76460HepG2HNRNPL
chr5104440708104440823-intron-Distal4.853299.11780K562QKI
chr5104354890104354980-intron-Distal4.214823.41738HepG2PTBP1
chr5104537005104537042-intron-Distal5.053577.06230K562EXOSC5
chr5104430974104431019-intron-Distal3.706984.61282K562EXOSC5
chr5104328079104328199-intron-Distal6.4400013.16771K562QKI
chr5104486365104486471-intron-Distal3.525325.15509K562SAFB2
chr5104276794104276873-intron-Distal5.027105.81225K562PTBP1
chr5104534275104534373-intron-Distal4.757836.62732K562HNRNPM
chr5104486471104486563-intron-Distal4.026183.86679K562SAFB2
chr5104537260104537293-intron-Distal4.053573.01456K562EXOSC5
chr5104453455104453529-intron-Distal3.641633.18722K562KHDRBS1
chr5104495775104495887-intron-Distal4.885678.62021K562HNRNPL
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CTD-2374C24.1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CTD-2374C24.1 is not available on ENCORE database.

  • No RBPs affect the gene expression of CTD-2374C24.1 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for CTD-2374C24.1 is not available on ENCORE database.






No RBPs affect the gene expression of CTD-2374C24.1 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for CTD-2374C24.1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CTD-2374C24.1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CTD-2374C24.1 is not avaliable on ENCORE database.