COG7

General Information

Gene Name       : COG7
Gene ID             : ENSG00000168434.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: COG7)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878COG7ENSG00000168434.125.177.236.20ENCSR000AEF
HepG2COG7ENSG00000168434.1226.0915.1520.62ENCSR985KAT
K562COG7ENSG00000168434.1213.6411.8112.73ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for COG7 is not avaliable on ENCORE database.



Proteins bound to RNA
  • COG7 RNA is bound by 25 proteins.  







eCLIP assay for COG7 is not avaliable on ENCORE database.





25 proteins are bound to COG7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr162340355023403663-3'-UTR,CDS,intron-Distal,intron-Proximal4.712106.08021K562PRPF8
chr162340035723400438-3'-UTR,CDS,intron-Distal5.116076.83960K562AQR
chr162342487623424944-CDS,intron-Distal,intron-Proximal5.4069820.61996K562SF3B4
chr162340364423403733-CDS,intron-Distal,intron-Proximal4.284525.93840HepG2PRPF8
chr162342839823428463-CDS,intron-Distal,intron-Proximal3.855953.95214K562GPKOW
chr162340367023403753-CDS,intron-Distal,intron-Proximal3.381203.99124HepG2PPIG
chr162340943323409510-CDS,intron-Distal,intron-Proximal3.867006.39986K562SF3B4
chr162342840323428442-CDS,intron-Distal3.271414.92880K562ZNF622
chr162343002923430039-CDS,intron-Distal6.6575718.07825K562AQR
chr162346411023464149-CDS,intron-Distal3.698955.23469HepG2AQR
chr162344595723446012-CDS,intron-Distal3.003088.59315HepG2BCLAF1
chr162342485323424904-CDS,intron-Distal,intron-Proximal4.3816311.12444HepG2U2AF2
chr162341747223417568-CDS,intron-Distal3.433095.91739K562UCHL5
chr162344495123444996-CDS,intron-Distal,intron-Proximal4.557985.29191K562BUD13
chr162342828723428357-CDS,intron-Distal,intron-Proximal3.484538.31208HepG2PPIG
chr162342839323428475-CDS,intron-Distal,intron-Proximal3.3073810.17465K562BUD13
chr162342999323430029-CDS,intron-Distal,intron-Proximal5.4220218.60307K562AQR
chr162344595623446004-CDS,intron-Distal,intron-Proximal4.150786.64430HepG2PPIG
chr162344497823444987-CDS,intron-Distal3.422593.57857HepG2BCLAF1
chr162345383823453905-CDS,intron-Distal3.665284.93175HepG2GRWD1
chr162345384923453890-CDS,intron-Distal3.357463.59112HepG2PPIG
chr162342843523428529-CDS,intron-Distal,intron-Proximal3.357983.10102HepG2SF3B4
chr162346411223464176-CDS,intron-Distal3.477524.77136HepG2PPIG
chr162342998723430046-CDS,intron-Distal,intron-Proximal3.538496.90700K562BUD13
chr162342838423428499-CDS,intron-Distal,intron-Proximal4.1803910.90247K562SF3B4
chr162342838923428473-CDS,intron-Distal,intron-Proximal4.188276.69182K562AQR
chr162340377323403842-CDS,intron-Distal3.966033.71057HepG2LSM11
chr162344489723444977-CDS,intron-Distal3.503953.21309HepG2GRWD1
chr162344487923444928-CDS,intron-Distal4.723456.21892HepG2PPIG
chr162342824423428295-CDS,intron-Distal,intron-Proximal4.743035.60100HepG2PRPF8
chr162344487123444949-CDS,intron-Distal3.837903.39325K562SRSF1
chr162341755023417584-CDS,intron-Distal,intron-Proximal4.481966.25151K562DDX24
chr162342483923424888-CDS,intron-Distal,intron-Proximal5.8478019.19318K562U2AF2
chr162345637523456411-CDS,intron-Distal3.070615.00751HepG2BCLAF1
chr162342999823430042-CDS,intron-Distal,intron-Proximal4.616744.67689HepG2PPIG
chr162343010623430179-CDS,intron-Distal,intron-Proximal3.908867.67375HepG2U2AF2
chr162345379623453834-CDS,intron-Distal,intron-Proximal3.059104.23325HepG2BCLAF1
chr162342996823430041-CDS,intron-Distal,intron-Proximal5.330106.35567HepG2PRPF8
chr162341741523417446-CDS,intron-Distal3.805354.46864HepG2BCLAF1
chr162342485023424935-CDS,intron-Distal,intron-Proximal4.284828.82365K562U2AF1
chr162346410123464173-CDS,intron-Distal3.868328.47339HepG2PRPF8
chr162341081323410916-intron-Distal5.7244611.34764HepG2PRPF4
chr162340073623400794-intron-Distal3.439383.44195K562TARDBP
chr162342992723429987-intron-Distal,intron-Proximal4.125576.88148K562BUD13
chr162341493523414986-intron-Distal,intron-Proximal3.229703.33087HepG2RBM22
chr162343151823431643-intron-Distal3.007723.19379K562KHSRP
chr162343387023433983-intron-Distal4.459569.55185HepG2HNRNPL
chr162346412923464147-intron-Distal5.616079.41643K562AQR
chr162341930623419437-intron-Distal4.791985.41835HepG2DDX59
chr162343597423436059-intron-Distal,intron-Proximal3.701306.10049K562TIA1
chr162342992823429990-intron-Distal,intron-Proximal4.407155.83621K562AQR
chr162343602823436069-intron-Distal,intron-Proximal4.618604.48002K562AQR
chr162340062023400713-intron-Distal6.1437210.98400K562EIF4G2
chr162346410123464129-intron-Distal5.6882710.48996K562AQR
chr162341439123414457-intron-Distal4.311143.41738HepG2PTBP1
chr162346408323464145-intron-Distal4.141544.59145HepG2XPO5
chr162340067623400736-intron-Distal4.402383.87294K562TARDBP
chr162342488823424907-intron-Distal,intron-Proximal5.7328417.92188K562U2AF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for COG7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for COG7 is not available on ENCORE database.

  • 53 RBPs can affect the levels of COG7.  








The Knockdown/knockout RNA-Seq assay for COG7 is not available on ENCORE database.





53 RBPs can affect the gene expression of COG7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
COG7ENSG00000168434.8523.39430695.22270-0.409604.146503.43050HepG2ACO1
COG7ENSG00000168434.8731.18410974.19920-0.414004.703403.84900HepG2AUH
COG7ENSG00000168434.8376.39420619.89590-0.719807.345706.17040HepG2CALR
COG7ENSG00000168434.8980.23910849.518400.206401.996101.35050HepG2DAZAP1
COG7ENSG00000168434.8533.42590642.94200-0.269402.131401.39190HepG2DDX19B
COG7ENSG00000168434.8518.13630665.11750-0.360302.910202.21580HepG2DKC1
COG7ENSG00000168434.8567.03730738.91710-0.382002.111801.55030HepG2EIF4A3
COG7ENSG00000168434.8950.510101118.50890-0.234802.062501.52750HepG2ETF1
COG7ENSG00000168434.8840.01360626.564900.422803.210902.36810HepG2FUBP3
COG7ENSG00000168434.8504.63170691.71430-0.454902.801502.13200HepG2G3BP1
COG7ENSG00000168434.8742.42100607.724700.288702.168601.52810HepG2HNRNPF
COG7ENSG00000168434.81027.74010773.816100.409305.984705.02570HepG2HNRNPL
COG7ENSG00000168434.8376.73760556.74110-0.563405.920105.06160HepG2HNRNPU
COG7ENSG00000168434.8624.77680928.19900-0.571103.765402.79350HepG2LARP4
COG7ENSG00000168434.8519.25340750.22410-0.530903.433802.73750HepG2MATR3
COG7ENSG00000168434.8816.04570529.191100.624803.192202.23590HepG2PABPC1
COG7ENSG00000168434.8376.67520609.79950-0.695004.058702.59700HepG2PRPF6
COG7ENSG00000168434.8643.43750765.39860-0.250401.873601.40630HepG2PTBP1
COG7ENSG00000168434.8646.19250804.15880-0.315501.910401.40180HepG2PUF60
COG7ENSG00000168434.8724.82010853.68230-0.236101.880001.37120HepG2PUM1
COG7ENSG00000168434.81055.44640828.925400.348403.108802.45340HepG2QKI
COG7ENSG00000168434.8544.02530934.86690-0.7811012.3553011.42130HepG2RBM22
COG7ENSG00000168434.8641.79210851.80730-0.408403.970803.34470HepG2NELFE
COG7ENSG00000168434.8383.04770654.70550-0.773307.965906.89930HepG2RPLP0
COG7ENSG00000168434.8359.51900457.80150-0.348701.836701.32570HepG2RPS19
COG7ENSG00000168434.8747.61120495.791100.592508.149407.13060HepG2SAFB2
COG7ENSG00000168434.8469.75660578.15690-0.299502.243101.65470HepG2SMN1
COG7ENSG00000168434.8629.06850794.02830-0.336002.783102.15530HepG2SRSF5
COG7ENSG00000168434.8584.76830916.77140-0.6487010.288509.42000HepG2SSB
COG7ENSG00000168434.8452.00290747.63590-0.726009.224908.29640HepG2TAF15
COG7ENSG00000168434.8522.16560786.49960-0.590907.460906.55560HepG2UTP3
COG7ENSG00000168434.8666.06620895.94480-0.427705.685104.97430HepG2ZNF622
COG7ENSG00000168434.81118.18400712.122800.650908.089407.18950K562AGGF1
COG7ENSG00000168434.81155.18970782.567300.561706.378004.72810K562AKAP8
COG7ENSG00000168434.81087.03700741.008800.552704.234403.42270K562AKAP8L
COG7ENSG00000168434.8944.93600605.371500.642306.068605.25710K562AQR
COG7ENSG00000168434.81003.14400777.520800.367502.561401.68470K562ATP5C1
COG7ENSG00000168434.8463.38020615.39340-0.409303.461002.74340K562DDX47
COG7ENSG00000168434.8554.97550418.177100.408202.835401.66190K562EIF4B
COG7ENSG00000168434.8387.74200482.89640-0.316601.822001.31030K562FXR1
COG7ENSG00000168434.8411.42230288.441900.512203.003802.17760K562GPKOW
COG7ENSG00000168434.8323.82230505.91200-0.643706.005404.67840K562HNRNPU
COG7ENSG00000168434.8572.85470416.718500.459003.327701.98590K562IGF2BP3
COG7ENSG00000168434.81147.28760786.350700.544906.753105.32980K562KIF1C
COG7ENSG00000168434.81007.15930752.767500.419903.535702.27350K562MAK16
COG7ENSG00000168434.81222.65350880.917700.472805.070703.76250K562MBNL1
COG7ENSG00000168434.8910.08800617.463400.559603.722102.66120K562NAA15
COG7ENSG00000168434.8305.04100461.99560-0.598903.298302.39080K562PCBP3
COG7ENSG00000168434.8509.91990360.228300.501303.470801.84990K562PHF6
COG7ENSG00000168434.8486.25350330.789500.555703.545102.50310K562PSIP1
COG7ENSG00000168434.81190.79040734.785900.696408.141007.25820K562PUS1
COG7ENSG00000168434.81171.80780716.014000.710605.324704.52640K562RBM15
COG7ENSG00000168434.8622.04160414.926000.584104.595403.67790K562TARDBP
COG7ENSG00000168434.8533.52060400.256100.414502.746401.93220K562TIA1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for COG7 is not available on ENCORE database.





12 RBPs can affect the splicing of COG7 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECOG7ENSG00000168434.8chr16-2340328223403555234000962340040723403700234038440.175000.000080.04699includedK562SMNDC1
SECOG7ENSG00000168434.8chr16-2340328223403555234000962340040723403700234038440.187000.000000.00022includedK562AKAP8L
SECOG7ENSG00000168434.8chr16-2340328223403555234000962340040723403700234038440.119000.000190.00689includedHepG2HNRNPK
SECOG7ENSG00000168434.8chr16-2340328223403555234000962340040723403700234038440.158000.000020.00053includedK562PUS1
SECOG7ENSG00000168434.8chr16-2340328223403555234000962340040723403700234038440.099000.001420.09707includedHepG2DDX6
SECOG7ENSG00000168434.8chr16-2340328223403555234000962340040723403700234038440.167000.000060.00371includedK562UTP18
SECOG7ENSG00000168434.8chr16-234032822340355523400096234004072340370023403844-0.202000.001820.05958excludedK562TARDBP
SECOG7ENSG00000168434.8chr16-2340328223403555234000962340040723403700234038440.208000.002230.06918includedK562HNRNPU
SECOG7ENSG00000168434.8chr16-2340328223403555234000962340040723403700234038440.112000.001790.04251includedK562RBM15
SECOG7ENSG00000168434.8chr16-2340328223403555234000962340040723403700234038440.134000.000260.00954includedK562AGGF1
SECOG7ENSG00000168434.8chr16-2340328223403555234000962340040723403700234038440.119000.000180.01133includedHepG2HNRNPU
SECOG7ENSG00000168434.8chr16-234032822340355523400096234004072340370023403844-0.232000.001570.05717excludedK562PTBP1
SECOG7ENSG00000168434.8chr16-234032822340355523400096234004072340370023403844-0.096000.000990.01908excludedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for COG7 is not avaliable on ENCORE database.