CCT6B

General Information

Gene Name       : CCT6B
Gene ID             : ENSG00000132141.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CCT6B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CCT6BENSG00000132141.132.041.731.89ENCSR000AEF
HepG2CCT6BENSG00000132141.130.130.320.23ENCSR985KAT
K562CCT6BENSG00000132141.130.350.230.29ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CCT6B is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on CCT6B RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CCT6B is not avaliable on ENCORE database.






NO known proteins are bound to CCT6B RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CCT6B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CCT6B is not available on ENCORE database.

  • 21 RBPs can affect the levels of CCT6B.  








The Knockdown/knockout RNA-Seq assay for CCT6B is not available on ENCORE database.





21 RBPs can affect the gene expression of CCT6B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CCT6BENSG00000132141.934.7304013.076201.409202.375701.80540HepG2ACO1
CCT6BENSG00000132141.9131.4668026.760002.2964010.395509.42980HepG2AKAP1
CCT6BENSG00000132141.938.138507.812502.287304.299403.57180HepG2BOP1
CCT6BENSG00000132141.927.222607.559301.848402.240501.55730HepG2CNOT7
CCT6BENSG00000132141.927.511907.898501.800302.372601.34840HepG2EFTUD2
CCT6BENSG00000132141.950.6436021.899601.209402.437401.81080HepG2G3BP1
CCT6BENSG00000132141.931.279308.510501.877802.599201.97060HepG2HNRNPA1
CCT6BENSG00000132141.945.207909.403802.265205.510504.67690HepG2HNRNPU
CCT6BENSG00000132141.935.918807.368802.285103.994702.37570HepG2ILF3
CCT6BENSG00000132141.9113.5447024.300902.2241010.076608.91220HepG2NCBP2
CCT6BENSG00000132141.970.7493021.655401.707905.180104.20440HepG2PABPC4
CCT6BENSG00000132141.959.7503018.484301.692503.220001.31150HepG2PSIP1
CCT6BENSG00000132141.953.9107025.031301.106702.185101.68800HepG2PTBP1
CCT6BENSG00000132141.941.5380012.671501.712702.671101.97750HepG2RAVER1
CCT6BENSG00000132141.969.6743027.859301.322403.255502.67820HepG2NELFE
CCT6BENSG00000132141.941.1260012.443601.724603.328402.29210HepG2RPS10
CCT6BENSG00000132141.968.6867026.644901.366104.053703.45800HepG2SSB
CCT6BENSG00000132141.931.613606.795402.217803.854102.55410HepG2XPO5
CCT6BENSG00000132141.928.1448010.148401.471501.952301.37060K562G3BP2
CCT6BENSG00000132141.945.3044013.360001.761603.902202.83620K562HNRNPU
CCT6BENSG00000132141.983.9087011.614602.8528010.225508.63340K562PCBP3
CCT6BENSG00000132141.975.583208.910403.0844012.0016010.38870K562POLR2G
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CCT6B is not available on ENCORE database.






No RBPs affect the alternative splcing events of CCT6B on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CCT6B is not avaliable on ENCORE database.