UBE2Q1

General Information

Gene Name : UBE2Q1
Gene ID : ENSG00000160714.9
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: UBE2Q1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	UBE2Q1	ENSG00000160714.9	47.51	43.48	45.49	ENCSR000AEF
HepG2	UBE2Q1	ENSG00000160714.9	37.15	41.35	39.25	ENCSR985KAT
K562	UBE2Q1	ENSG00000160714.9	28.17	32.50	30.34	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for UBE2Q1 is not avaliable on ENCORE database.

Proteins bound to RNA

UBE2Q1 RNA is bound by 20 proteins.

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eCLIP assay for UBE2Q1 is not avaliable on ENCORE database.

20 proteins are bound to UBE2Q1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	154530868	154530970	-	CDS,intron-Distal,intron-Proximal	5.63441	36.96410	HepG2	GRSF1
chr1	154531037	154531139	-	5'-UTR,intron-Distal,intron-Proximal	4.76020	28.84780	HepG2	DDX3X
chr1	154530728	154530816	-	CDS,intron-Distal	4.02763	12.81656	HepG2	DDX3X
chr1	154530889	154530970	-	CDS,intron-Distal,intron-Proximal	3.81056	12.12922	HepG2	DDX3X
chr1	154524193	154524292	-	CDS,intron-Distal,intron-Proximal	4.62469	11.59041	HepG2	EFTUD2
chr1	154527165	154527226	-	CDS,intron-Distal,intron-Proximal	3.37707	8.16221	HepG2	PRPF8
chr1	154525528	154525569	-	CDS,intron-Distal,intron-Proximal	5.18784	8.07539	HepG2	BCLAF1
chr1	154525569	154525653	-	CDS,intron-Distal,intron-Proximal	3.58342	7.93794	HepG2	BCLAF1
chr1	154525537	154525644	-	CDS,intron-Distal,intron-Proximal	3.32243	7.86771	K562	ZNF622
chr1	154524879	154524942	-	CDS,intron-Distal,intron-Proximal	5.32628	7.65820	K562	LIN28B
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 51 entries

eCLIP assay for UBE2Q1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for UBE2Q1 is not available on ENCORE database.
61 RBPs can affect the levels of UBE2Q1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for UBE2Q1 is not available on ENCORE database.

61 RBPs can affect the gene expression of UBE2Q1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
UBE2Q1	ENSG00000160714.5	462.91330	1414.08590	-1.61110	53.91570	51.84470	HepG2	TAF15
UBE2Q1	ENSG00000160714.5	688.70180	1822.00040	-1.40360	31.72210	29.64210	HepG2	NSUN2
UBE2Q1	ENSG00000160714.5	1122.57540	1787.26580	-0.67090	20.68760	18.92300	K562	NSUN2
UBE2Q1	ENSG00000160714.5	1312.17760	731.50690	0.84290	17.71910	16.29840	K562	FXR1
UBE2Q1	ENSG00000160714.5	650.46810	1084.48370	-0.73750	16.45400	14.81200	HepG2	DDX19B
UBE2Q1	ENSG00000160714.5	3142.31150	2101.01890	0.58060	14.98460	13.58460	K562	DDX47
UBE2Q1	ENSG00000160714.5	3051.74400	1701.18650	0.84300	14.69220	13.20580	HepG2	U2AF1
UBE2Q1	ENSG00000160714.5	1048.74700	1899.46650	-0.85690	13.36290	11.98180	HepG2	CPSF6
UBE2Q1	ENSG00000160714.5	1411.05380	797.47820	0.82320	10.74830	9.25630	K562	PRPF8
UBE2Q1	ENSG00000160714.5	730.95590	1121.88310	-0.61810	10.13180	8.99960	HepG2	DKC1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 67 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for UBE2Q1 is not available on ENCORE database.

8 RBPs can affect the splicing of UBE2Q1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	UBE2Q1	ENSG00000160714.5	chr1	-	154523104	154523233	154521052	154522945	154523413	154523480	0.05500	0.00000	0.00000	included	K562	HNRNPL
A3SS	UBE2Q1	ENSG00000160714.5	chr1	-	154524568	154524777	154524568	154524659	154524879	154524940	0.07800	0.00000	0.00005	longer	HepG2	TAF15
A3SS	UBE2Q1	ENSG00000160714.5	chr1	-	154523364	154523549	154523364	154523480	154523872	154524009	0.08600	0.00000	0.00000	longer	K562	AQR
A3SS	UBE2Q1	ENSG00000160714.5	chr1	-	154524568	154524777	154524568	154524659	154524879	154525018	0.12600	0.00000	0.00000	longer	K562	AQR
A3SS	UBE2Q1	ENSG00000160714.5	chr1	-	154527903	154528055	154527903	154528008	154528335	154528440	0.06000	0.00000	0.00003	longer	K562	AQR
A3SS	UBE2Q1	ENSG00000160714.5	chr1	-	154523872	154524101	154523872	154523968	154524246	154524295	0.12900	0.00000	0.00000	longer	K562	AQR
A3SS	UBE2Q1	ENSG00000160714.5	chr1	-	154525211	154525357	154525211	154525296	154525507	154525719	0.08500	0.00000	0.00000	longer	K562	AQR
A3SS	UBE2Q1	ENSG00000160714.5	chr1	-	154524568	154524777	154524568	154524659	154524879	154524940	0.08700	0.00000	0.00001	longer	K562	PUS1
RI	UBE2Q1	ENSG00000160714.5	chr1	-	154524879	154525296	154524879	154524940	154525211	154525296	0.09100	0.00000	0.00002	included	K562	AKAP8L
RI	UBE2Q1	ENSG00000160714.5	chr1	-	154524879	154525296	154524879	154524940	154525211	154525296	0.05200	0.00001	0.00028	included	HepG2	TAF15

Showing 1 to 10 of 19 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

UBE2Q1

General Information

Functions

Localization

Domains (AlphaFold: UBE2Q1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for UBE2Q1 is not avaliable on ENCORE database.

20 proteins are bound to UBE2Q1 RNA:

eCLIP assay for UBE2Q1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for UBE2Q1 is not available on ENCORE database.

61 RBPs can affect the gene expression of UBE2Q1 :

The Knockdown/knockout RNA-Seq assay for UBE2Q1 is not available on ENCORE database.

8 RBPs can affect the splicing of UBE2Q1 :

The Knockdown/knockout RNA-Seq assay for UBE2Q1 is not avaliable on ENCORE database.