TMEM161B-AS1

General Information

Gene Name : TMEM161B-AS1
Gene ID : ENSG00000247828.7
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TMEM161B-AS1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TMEM161B-AS1	ENSG00000247828.7	12.28	9.14	10.71	ENCSR000AEF
HepG2	TMEM161B-AS1	ENSG00000247828.7	5.47	6.70	6.08	ENCSR985KAT
K562	TMEM161B-AS1	ENSG00000247828.7	19.02	15.96	17.49	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TMEM161B-AS1 is not avaliable on ENCORE database.

Proteins bound to RNA

TMEM161B-AS1 RNA is bound by 22 proteins.

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eCLIP assay for TMEM161B-AS1 is not avaliable on ENCORE database.

22 proteins are bound to TMEM161B-AS1 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr5	87571230	87571336	+	intron-Distal	4.79468	35.82611	K562	QKI
chr5	87570873	87571027	+	intron-Distal	5.84346	15.93546	K562	MATR3
chr5	87583245	87583328	+	intron-Distal,intron-Proximal	4.74682	15.61325	K562	UCHL5
chr5	87571256	87571359	+	intron-Distal	6.19719	12.92705	HepG2	QKI
chr5	87571426	87571494	+	intron-Distal	3.59249	12.43138	K562	KHSRP
chr5	87571027	87571109	+	intron-Distal	4.58995	12.12257	K562	MATR3
chr5	87571268	87571375	+	intron-Distal	3.72110	11.36345	K562	KHSRP
chr5	87570841	87570935	+	intron-Distal	3.18791	10.25361	HepG2	SUGP2
chr5	87566580	87566671	+	intron-Distal	5.18389	10.10176	K562	SRSF1
chr5	87566436	87566645	+	intron-Distal,intron-Proximal	3.19476	9.70086	K562	FUS
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 45 entries

eCLIP assay for TMEM161B-AS1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TMEM161B-AS1 is not available on ENCORE database.
43 RBPs can affect the levels of TMEM161B-AS1.

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The Knockdown/knockout RNA-Seq assay for TMEM161B-AS1 is not available on ENCORE database.

43 RBPs can affect the gene expression of TMEM161B-AS1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TMEM161B-AS1	ENSG00000247828.3	214.26000	39.72840	2.43100	19.46350	17.99120	HepG2	EIF2S1
TMEM161B-AS1	ENSG00000247828.3	228.84850	550.07360	-1.26520	18.49750	16.92800	K562	RBM15
TMEM161B-AS1	ENSG00000247828.3	261.23680	547.08270	-1.06640	14.89020	13.68230	K562	AGGF1
TMEM161B-AS1	ENSG00000247828.3	272.44920	564.61660	-1.05130	11.65800	10.59120	K562	PUS1
TMEM161B-AS1	ENSG00000247828.3	162.58640	43.90830	1.88850	11.12380	9.87060	HepG2	EIF4A3
TMEM161B-AS1	ENSG00000247828.3	291.29630	569.25420	-0.96660	10.78760	9.38210	K562	AKAP8L
TMEM161B-AS1	ENSG00000247828.3	378.12400	676.80290	-0.83990	9.66570	7.76960	K562	MBNL1
TMEM161B-AS1	ENSG00000247828.3	351.60170	604.15650	-0.78100	7.90240	6.33080	K562	KIF1C
TMEM161B-AS1	ENSG00000247828.3	375.24210	597.26540	-0.67060	7.43120	5.82640	K562	ATP5C1
TMEM161B-AS1	ENSG00000247828.3	234.34970	474.38670	-1.01740	7.39660	5.69190	K562	NAA15
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 44 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TMEM161B-AS1 is not available on ENCORE database.

19 RBPs can affect the splicing of TMEM161B-AS1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TMEM161B-AS1	ENSG00000247828.3	chr5	+	87581557	87581668	87578531	87578683	87583252	87583473	-0.63300	0.00000	0.00000	excluded	K562	SRSF1
SE	TMEM161B-AS1	ENSG00000247828.3	chr5	+	87565284	87565434	87564860	87564936	87566342	87566402	-0.25600	0.00000	0.00009	excluded	K562	SRSF1
SE	TMEM161B-AS1	ENSG00000247828.3	chr5	+	87565284	87565434	87564860	87564936	87566342	87566402	-0.16300	0.00000	0.00013	excluded	K562	U2AF1
SE	TMEM161B-AS1	ENSG00000247828.3	chr5	+	87577858	87577923	87566342	87566402	87732089	87732491	-0.39700	0.00000	0.00021	excluded	K562	U2AF1
SE	TMEM161B-AS1	ENSG00000247828.3	chr5	+	87577858	87577923	87566342	87566402	87732089	87732491	-0.53900	0.00000	0.00000	excluded	K562	U2AF2
SE	TMEM161B-AS1	ENSG00000247828.3	chr5	+	87565284	87565504	87564860	87564936	87566342	87566402	-0.16900	0.00001	0.00022	excluded	K562	U2AF2
SE	TMEM161B-AS1	ENSG00000247828.3	chr5	+	87565284	87565504	87564860	87564936	87566342	87566402	-0.23500	0.00002	0.00216	excluded	K562	HNRNPK
SE	TMEM161B-AS1	ENSG00000247828.3	chr5	+	87581557	87581720	87578531	87578683	87583252	87583473	-0.34500	0.00003	0.05928	excluded	K562	CPEB4
SE	TMEM161B-AS1	ENSG00000247828.3	chr5	+	87565284	87565504	87564860	87564936	87566342	87566402	-0.17900	0.00012	0.00295	excluded	K562	PUS1
SE	TMEM161B-AS1	ENSG00000247828.3	chr5	+	87565284	87565504	87564860	87564936	87566342	87566402	-0.28100	0.00013	0.02988	excluded	K562	EIF3G

Showing 1 to 10 of 25 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TMEM161B-AS1

General Information

Functions

Localization

Domains (AlphaFold: TMEM161B-AS1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TMEM161B-AS1 is not avaliable on ENCORE database.

22 proteins are bound to TMEM161B-AS1 RNA:

eCLIP assay for TMEM161B-AS1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TMEM161B-AS1 is not available on ENCORE database.

43 RBPs can affect the gene expression of TMEM161B-AS1 :

The Knockdown/knockout RNA-Seq assay for TMEM161B-AS1 is not available on ENCORE database.

19 RBPs can affect the splicing of TMEM161B-AS1 :

The Knockdown/knockout RNA-Seq assay for TMEM161B-AS1 is not avaliable on ENCORE database.