SPAG1

General Information

Gene Name : SPAG1
Gene ID : ENSG00000104450.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SPAG1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SPAG1	ENSG00000104450.12	14.21	9.75	11.98	ENCSR000AEF
HepG2	SPAG1	ENSG00000104450.12	1.89	3.19	2.54	ENCSR985KAT
K562	SPAG1	ENSG00000104450.12	0.61	0.43	0.52	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SPAG1 is not avaliable on ENCORE database.

Proteins bound to RNA

SPAG1 RNA is bound by 1 proteins.

CanvasJS.com

eCLIP assay for SPAG1 is not avaliable on ENCORE database.

1 proteins are bound to SPAG1 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	101197390	101197473	+	intron-Distal	4.11467	3.04630	K562	TROVE2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 1 of 1 entries

eCLIP assay for SPAG1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SPAG1 is not available on ENCORE database.
57 RBPs can affect the levels of SPAG1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SPAG1 is not available on ENCORE database.

57 RBPs can affect the gene expression of SPAG1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SPAG1	ENSG00000104450.8	632.98500	210.19740	1.59030	30.33370	28.98280	HepG2	RBM22
SPAG1	ENSG00000104450.8	558.10460	237.41220	1.23300	19.83070	18.81010	HepG2	SRFBP1
SPAG1	ENSG00000104450.8	471.54270	126.29710	1.90050	16.10320	14.54370	HepG2	RAVER1
SPAG1	ENSG00000104450.8	369.96130	144.16520	1.35960	11.45000	10.14610	HepG2	U2AF1
SPAG1	ENSG00000104450.8	334.44840	143.90770	1.21650	11.49090	10.09350	HepG2	CALR
SPAG1	ENSG00000104450.8	423.56730	168.54960	1.32930	10.47100	9.10860	HepG2	FIP1L1
SPAG1	ENSG00000104450.8	254.22350	103.09310	1.30200	9.99920	8.91840	HepG2	RPS19
SPAG1	ENSG00000104450.8	265.45340	130.21050	1.02750	8.73830	7.65620	HepG2	ZC3H8
SPAG1	ENSG00000104450.8	421.31260	196.81780	1.09790	8.03570	7.18030	HepG2	AKAP1
SPAG1	ENSG00000104450.8	249.55340	103.94420	1.26340	7.75990	6.52670	HepG2	RRP9
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 59 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SPAG1 is not available on ENCORE database.

2 RBPs can affect the splicing of SPAG1 :

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Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	SPAG1	ENSG00000104450.8	chr8	+	101251467	101251632			101245398	101245765	101252630	101252743	-0.29200	0.00038	0.00618	excluded	HepG2	U2AF2
MXE	SPAG1	ENSG00000104450.8	chr8	+	101245638	101245765	101251467	101251632	101243383	101243516	101252630	101252999	-0.42300	0.00163	0.07312	2included	K562	UTP18

Showing 1 to 2 of 2 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SPAG1

General Information

Functions

Localization

Domains (AlphaFold: SPAG1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SPAG1 is not avaliable on ENCORE database.

1 proteins are bound to SPAG1 RNA:

eCLIP assay for SPAG1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SPAG1 is not available on ENCORE database.

57 RBPs can affect the gene expression of SPAG1 :

The Knockdown/knockout RNA-Seq assay for SPAG1 is not available on ENCORE database.

2 RBPs can affect the splicing of SPAG1 :

The Knockdown/knockout RNA-Seq assay for SPAG1 is not avaliable on ENCORE database.