SAGE1

General Information

Gene Name : SAGE1
Gene ID : ENSG00000181433.9
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SAGE1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SAGE1	ENSG00000181433.9	0.00	0.00	0.00	ENCSR000AEF
HepG2	SAGE1	ENSG00000181433.9	0.00	0.00	0.00	ENCSR985KAT
K562	SAGE1	ENSG00000181433.9	20.86	21.87	21.37	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SAGE1 is not avaliable on ENCORE database.

Proteins bound to RNA

SAGE1 RNA is bound by 5 proteins.

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eCLIP assay for SAGE1 is not avaliable on ENCORE database.

5 proteins are bound to SAGE1 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chrX	134978405	134978472	+	CDS	3.81277	8.37042	K562	ZNF622
chrX	134987561	134987688	+	intron-Distal,intron-Proximal	4.36123	5.44709	K562	KHSRP
chrX	134978417	134978480	+	CDS	3.82140	5.03335	K562	UCHL5
chrX	134987607	134987696	+	intron-Distal,intron-Proximal	3.97471	4.93376	K562	PRPF8
chrX	134994253	134994453	+	intron-Distal,intron-Proximal	3.32688	4.76825	K562	KHSRP
chrX	134987530	134987607	+	CDS,intron-Proximal	3.40808	4.64824	K562	PRPF8
chrX	134988241	134988298	+	CDS,intron-Distal	4.27832	4.07072	K562	UCHL5
chrX	134988029	134988092	+	intron-Distal,intron-Proximal	3.84891	3.21228	K562	TIA1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 8 of 8 entries

eCLIP assay for SAGE1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SAGE1 is not available on ENCORE database.
37 RBPs can affect the levels of SAGE1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SAGE1 is not available on ENCORE database.

37 RBPs can affect the gene expression of SAGE1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SAGE1	ENSG00000181433.5	1470.22530	755.20360	0.96100	19.86440	17.82720	K562	POLR2G
SAGE1	ENSG00000181433.5	1915.49350	984.53150	0.96010	14.06140	12.21620	K562	PCBP3
SAGE1	ENSG00000181433.5	1439.25040	891.16760	0.69140	13.33260	11.93590	K562	EIF2S2
SAGE1	ENSG00000181433.5	1121.48780	1625.23820	-0.53520	9.86950	8.88090	K562	AGGF1
SAGE1	ENSG00000181433.5	845.65380	1326.50130	-0.64950	7.91640	7.00890	K562	AQR
SAGE1	ENSG00000181433.5	1023.82480	581.12150	0.81700	9.10200	6.88560	K562	FKBP4
SAGE1	ENSG00000181433.5	1023.28710	669.55950	0.61180	6.95510	6.04890	K562	HNRNPC
SAGE1	ENSG00000181433.5	1305.50200	1002.97280	0.38020	6.16360	5.10970	K562	NSUN2
SAGE1	ENSG00000181433.5	1404.47440	1063.47450	0.40110	5.79000	4.79460	K562	UPF1
SAGE1	ENSG00000181433.5	1213.43250	1691.11060	-0.47890	5.25280	4.33970	K562	AKAP8L
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 37 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SAGE1 is not available on ENCORE database.

10 RBPs can affect the splicing of SAGE1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A5SS	SAGE1	ENSG00000181433.5	chrX	+	134975784	134975994	134975784	134975951	134978401	134978488	0.37000	0.00001	0.00228	longer	K562	FXR1
SE	SAGE1	ENSG00000181433.5	chrX	+	134987800	134988007	134987410	134987551	134988182	134988323	0.39600	0.00002	0.00088	included	K562	SRSF1
SE	SAGE1	ENSG00000181433.5	chrX	+	134987800	134987941	134987410	134987551	134988182	134988323	0.34000	0.00004	0.00880	included	K562	FMR1
A5SS	SAGE1	ENSG00000181433.5	chrX	+	134975884	134975994	134975884	134975932	134978401	134978488	0.36100	0.00025	0.03267	longer	K562	EFTUD2
SE	SAGE1	ENSG00000181433.5	chrX	+	134987800	134987941	134987410	134987551	134988182	134988323	0.25500	0.00028	0.07150	included	K562	PPIL4
SE	SAGE1	ENSG00000181433.5	chrX	+	134987800	134988007	134987410	134987551	134988182	134988323	0.22500	0.00053	0.01250	included	K562	SF3B4
A5SS	SAGE1	ENSG00000181433.5	chrX	+	134975784	134975994	134975784	134975951	134978401	134978488	-0.15400	0.00102	0.08155	shorter	K562	AKAP8L
SE	SAGE1	ENSG00000181433.5	chrX	+	134989859	134990000	134989471	134989612	134990247	134990388	-0.06600	0.00160	0.02512	excluded	K562	PUS1
SE	SAGE1	ENSG00000181433.5	chrX	+	134989859	134990000	134989471	134989612	134990247	134990388	-0.07200	0.00243	0.05328	excluded	K562	RBM15
SE	SAGE1	ENSG00000181433.5	chrX	+	134987800	134988007	134987410	134987551	134988182	134988323	0.32300	0.00289	0.02968	included	K562	AQR

Showing 1 to 10 of 10 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SAGE1

General Information

Functions

Localization

Domains (AlphaFold: SAGE1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SAGE1 is not avaliable on ENCORE database.

5 proteins are bound to SAGE1 RNA:

eCLIP assay for SAGE1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SAGE1 is not available on ENCORE database.

37 RBPs can affect the gene expression of SAGE1 :

The Knockdown/knockout RNA-Seq assay for SAGE1 is not available on ENCORE database.

10 RBPs can affect the splicing of SAGE1 :

The Knockdown/knockout RNA-Seq assay for SAGE1 is not avaliable on ENCORE database.