LRWD1

General Information

Gene Name : LRWD1
Gene ID : ENSG00000161036.12
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: LRWD1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	LRWD1	ENSG00000161036.12	3.88	12.41	8.14	ENCSR000AEF
HepG2	LRWD1	ENSG00000161036.12	14.25	5.08	9.66	ENCSR985KAT
K562	LRWD1	ENSG00000161036.12	37.83	22.33	30.08	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for LRWD1 is not avaliable on ENCORE database.

Proteins bound to RNA

LRWD1 RNA is bound by 3 proteins.

CanvasJS.com

eCLIP assay for LRWD1 is not avaliable on ENCORE database.

3 proteins are bound to LRWD1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	102105451	102105604	+	5'-UTR,CDS	3.39255	6.12311	K562	DDX3X
chr7	102110329	102110396	+	intron-Proximal	4.72183	5.17615	K562	AQR
chr7	102109511	102109593	+	intron-Proximal	4.67206	4.86944	K562	AQR
chr7	102108813	102108963	+	3'-UTR,CDS,intron-Proximal	3.14022	4.63145	K562	BUD13
chr7	102106261	102106370	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.77092	3.08493	K562	DDX3X
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 5 of 5 entries

eCLIP assay for LRWD1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for LRWD1 is not available on ENCORE database.
94 RBPs can affect the levels of LRWD1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for LRWD1 is not available on ENCORE database.

94 RBPs can affect the gene expression of LRWD1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
LRWD1	ENSG00000161036.6	396.47270	85.21800	2.21790	34.40410	33.00040	HepG2	TIAL1
LRWD1	ENSG00000161036.6	661.87080	220.88650	1.58310	30.75060	28.63170	K562	PTBP1
LRWD1	ENSG00000161036.6	374.60410	133.74020	1.48580	20.27730	18.84160	HepG2	SUCLG1
LRWD1	ENSG00000161036.6	434.25440	118.65130	1.87170	20.13030	18.55690	HepG2	MATR3
LRWD1	ENSG00000161036.6	336.58610	126.43410	1.41250	18.71520	17.45190	HepG2	PUM1
LRWD1	ENSG00000161036.6	542.60460	216.56150	1.32500	18.45070	16.64860	K562	SRSF1
LRWD1	ENSG00000161036.6	488.55250	211.38960	1.20850	15.23380	13.19720	K562	TIA1
LRWD1	ENSG00000161036.6	512.18080	227.33870	1.17170	15.22980	13.14460	K562	MAGOH
LRWD1	ENSG00000161036.6	276.50890	117.59810	1.23340	11.72820	10.56490	HepG2	SRSF5
LRWD1	ENSG00000161036.6	279.67420	98.29290	1.50850	11.30280	9.77870	HepG2	RPS2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 103 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for LRWD1 is not available on ENCORE database.

12 RBPs can affect the splicing of LRWD1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	LRWD1	ENSG00000161036.6	chr7	+	102107785	102107926			102106600	102106717	102108165	102108270	-0.09700	0.00000	0.00001	excluded	K562	AQR
SE	LRWD1	ENSG00000161036.6	chr7	+	102107785	102107926			102106600	102106717	102108165	102108270	-0.21900	0.00000	0.00000	excluded	K562	HNRNPC
MXE	LRWD1	ENSG00000161036.6	chr7	+	102107785	102107926	102108111	102108270	102106600	102106717	102108508	102108634	-0.27200	0.00000	0.00000	2included	K562	UCHL5
MXE	LRWD1	ENSG00000161036.6	chr7	+	102107785	102107926	102108165	102108270	102106600	102106717	102108508	102108634	-0.28800	0.00000	0.00000	2included	K562	UCHL5
MXE	LRWD1	ENSG00000161036.6	chr7	+	102107785	102107926	102108165	102108270	102106600	102106717	102108508	102108634	-0.24000	0.00000	0.00001	2included	K562	XRN2
MXE	LRWD1	ENSG00000161036.6	chr7	+	102107785	102107926	102108165	102108270	102106600	102106717	102108508	102108634	-0.28000	0.00000	0.00004	2included	K562	SUPV3L1
MXE	LRWD1	ENSG00000161036.6	chr7	+	102107785	102107926	102108165	102108270	102106600	102106717	102108508	102108634	-0.17800	0.00003	0.00203	2included	K562	EFTUD2
MXE	LRWD1	ENSG00000161036.6	chr7	+	102107785	102107926	102108165	102108270	102106600	102106717	102108508	102108634	-0.16900	0.00008	0.01232	2included	K562	NONO
MXE	LRWD1	ENSG00000161036.6	chr7	+	102107785	102107926	102108165	102108270	102106600	102106717	102108508	102108634	-0.16500	0.00018	0.04238	2included	K562	GEMIN5
MXE	LRWD1	ENSG00000161036.6	chr7	+	102107785	102107926	102108165	102108270	102106600	102106717	102108508	102108634	-0.21600	0.00036	0.01057	2included	K562	PRPF8

Showing 1 to 10 of 17 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

LRWD1

General Information

Functions

Localization

Domains (AlphaFold: LRWD1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for LRWD1 is not avaliable on ENCORE database.

3 proteins are bound to LRWD1 RNA:

eCLIP assay for LRWD1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for LRWD1 is not available on ENCORE database.

94 RBPs can affect the gene expression of LRWD1 :

The Knockdown/knockout RNA-Seq assay for LRWD1 is not available on ENCORE database.

12 RBPs can affect the splicing of LRWD1 :

The Knockdown/knockout RNA-Seq assay for LRWD1 is not avaliable on ENCORE database.