EXTL2

General Information

Gene Name : EXTL2
Gene ID : ENSG00000162694.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: EXTL2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	EXTL2	ENSG00000162694.13	11.67	12.93	12.30	ENCSR000AEF
HepG2	EXTL2	ENSG00000162694.13	9.29	18.89	14.09	ENCSR985KAT
K562	EXTL2	ENSG00000162694.13	14.73	14.28	14.50	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for EXTL2 is not avaliable on ENCORE database.

Proteins bound to RNA

EXTL2 RNA is bound by 3 proteins.

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eCLIP assay for EXTL2 is not avaliable on ENCORE database.

3 proteins are bound to EXTL2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	101343955	101344080	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.56741	7.15738	HepG2	U2AF2
chr1	101360156	101360235	-	5'-UTR,intron-Distal,intron-Proximal	3.68751	6.04280	HepG2	PRPF8
chr1	101343413	101343474	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.61637	4.79708	HepG2	U2AF2
chr1	101339916	101340021	-	CDS,intron-Distal	3.38163	4.57751	HepG2	U2AF2
chr1	101353814	101353889	-	intron-Distal,intron-Proximal	3.89058	3.57189	K562	ILF3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 5 of 5 entries

eCLIP assay for EXTL2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for EXTL2 is not available on ENCORE database.
64 RBPs can affect the levels of EXTL2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for EXTL2 is not available on ENCORE database.

64 RBPs can affect the gene expression of EXTL2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
EXTL2	ENSG00000162694.9	185.29350	629.20110	-1.76370	25.56420	23.61260	HepG2	G3BP1
EXTL2	ENSG00000162694.9	196.26260	604.81710	-1.62370	27.54230	23.47810	K562	G3BP1
EXTL2	ENSG00000162694.9	294.16370	575.51890	-0.96820	12.56620	11.63350	HepG2	TIAL1
EXTL2	ENSG00000162694.9	440.18610	811.89510	-0.88320	11.97360	10.85390	HepG2	PUF60
EXTL2	ENSG00000162694.9	302.71070	527.39610	-0.80090	10.27070	9.15110	HepG2	SAFB2
EXTL2	ENSG00000162694.9	275.33510	530.50260	-0.94620	9.19770	8.25650	K562	PUS1
EXTL2	ENSG00000162694.9	525.67510	850.57620	-0.69430	9.25180	7.88410	HepG2	NOL12
EXTL2	ENSG00000162694.9	399.68190	615.05490	-0.62190	7.99810	6.99520	HepG2	SMN1
EXTL2	ENSG00000162694.9	314.80130	513.99010	-0.70730	7.48880	6.62030	K562	AGGF1
EXTL2	ENSG00000162694.9	349.61750	654.51410	-0.90460	6.58780	5.55840	HepG2	EIF4B
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 71 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for EXTL2 is not available on ENCORE database.

7 RBPs can affect the splicing of EXTL2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	EXTL2	ENSG00000162694.9	chr1	-	101354308	101354384	101343031	101343459	101360188	101360237	-0.35200	0.00003	0.00107	excluded	K562	U2AF2
SE	EXTL2	ENSG00000162694.9	chr1	-	101341588	101341831	101339111	101339986	101342349	101342420	0.10800	0.00047	0.07935	included	K562	APOBEC3C
SE	EXTL2	ENSG00000162694.9	chr1	-	101342349	101342420	101339715	101339986	101343031	101343459	-0.10700	0.00190	0.02101	excluded	K562	AQR
SE	EXTL2	ENSG00000162694.9	chr1	-	101354308	101354384	101343371	101343459	101360188	101360220	-0.22700	0.00208	0.07791	excluded	K562	HNRNPK
SE	EXTL2	ENSG00000162694.9	chr1	-	101354308	101354384	101343371	101343459	101360188	101360220	-0.32400	0.00331	0.06723	excluded	K562	RBM15
SE	EXTL2	ENSG00000162694.9	chr1	-	101341588	101341762	101337942	101339986	101342349	101342420	0.09400	0.00461	0.08325	included	HepG2	SRSF1
SE	EXTL2	ENSG00000162694.9	chr1	-	101354308	101354420	101343031	101343459	101360188	101360368	-0.22700	0.00530	0.04879	excluded	K562	AQR
SE	EXTL2	ENSG00000162694.9	chr1	-	101354308	101354384	101343031	101343459	101360188	101360237	-0.23900	0.00601	0.08538	excluded	K562	SF3B4

Showing 1 to 8 of 8 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

EXTL2

General Information

Functions

Localization

Domains (AlphaFold: EXTL2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for EXTL2 is not avaliable on ENCORE database.

3 proteins are bound to EXTL2 RNA:

eCLIP assay for EXTL2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for EXTL2 is not available on ENCORE database.

64 RBPs can affect the gene expression of EXTL2 :

The Knockdown/knockout RNA-Seq assay for EXTL2 is not available on ENCORE database.

7 RBPs can affect the splicing of EXTL2 :

The Knockdown/knockout RNA-Seq assay for EXTL2 is not avaliable on ENCORE database.