E2F6

General Information

Gene Name : E2F6
Gene ID : ENSG00000169016.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: E2F6)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	E2F6	ENSG00000169016.16	7.36	7.42	7.39	ENCSR000AEF
HepG2	E2F6	ENSG00000169016.16	20.73	36.93	28.83	ENCSR985KAT
K562	E2F6	ENSG00000169016.16	17.89	16.53	17.21	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for E2F6 is not avaliable on ENCORE database.

Proteins bound to RNA

E2F6 RNA is bound by 12 proteins.

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eCLIP assay for E2F6 is not avaliable on ENCORE database.

12 proteins are bound to E2F6 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	11586039	11586139	-	3'-UTR,intron-Distal	6.60812	22.29472	K562	PUM2
chr2	11605854	11605904	-	5'-UTR,CDS,intron-Distal	3.90904	17.05206	HepG2	PRPF8
chr2	11605767	11605873	-	intron-Distal	5.01687	14.44022	HepG2	EFTUD2
chr2	11605904	11605922	-	5'-UTR,CDS,intron-Distal	3.37506	7.18673	HepG2	PRPF8
chr2	11606117	11606273	-	5'-UTR,intron-Distal,intron-Proximal	3.09464	6.46609	HepG2	NCBP2
chr2	11605759	11605924	-	5'-UTR,CDS,intron-Distal	5.25111	6.45599	K562	PRPF8
chr2	11593658	11593709	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.18137	6.22530	K562	AQR
chr2	11605930	11605987	-	5'-UTR,CDS,intron-Distal	3.62120	6.19204	K562	YBX3
chr2	11605898	11605987	-	5'-UTR,CDS,intron-Distal	3.58705	5.82148	K562	DDX3X
chr2	11590262	11590348	-	intron-Distal,intron-Proximal	5.16688	5.54528	HepG2	QKI
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 16 entries

eCLIP assay for E2F6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for E2F6 is not available on ENCORE database.
61 RBPs can affect the levels of E2F6.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for E2F6 is not available on ENCORE database.

61 RBPs can affect the gene expression of E2F6 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
E2F6	ENSG00000169016.12	1126.61730	572.78530	0.97580	23.04650	21.56690	HepG2	UTP3
E2F6	ENSG00000169016.12	1168.83480	652.49060	0.84090	22.01630	20.83420	HepG2	ZNF622
E2F6	ENSG00000169016.12	2150.27590	1340.78280	0.68130	19.35790	18.34610	HepG2	SRFBP1
E2F6	ENSG00000169016.12	1787.55880	1141.74110	0.64670	17.64420	16.41370	HepG2	PUM1
E2F6	ENSG00000169016.12	1165.29560	601.26680	0.95450	13.38310	11.72400	K562	PRPF8
E2F6	ENSG00000169016.12	218.75880	436.58840	-0.99690	12.66620	11.39970	HepG2	ZC3H8
E2F6	ENSG00000169016.12	921.95820	555.37600	0.73110	11.52390	10.37580	K562	FXR1
E2F6	ENSG00000169016.12	923.32930	497.19510	0.89290	10.86840	9.60280	HepG2	U2AF1
E2F6	ENSG00000169016.12	437.81300	847.29010	-0.95250	10.60900	9.49510	HepG2	EIF2S1
E2F6	ENSG00000169016.12	2034.98650	1420.23410	0.51880	9.97690	8.95010	HepG2	ETF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 67 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for E2F6 is not available on ENCORE database.

22 RBPs can affect the splicing of E2F6 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	E2F6	ENSG00000169016.12	chr2	-	11595467	11595600	11593707	11593924	11597304	11597359	0.27200	0.00024	included	HepG2	G3BP1
SE	E2F6	ENSG00000169016.12	chr2	-	11597304	11597359	11593707	11593924	11605897	11606272	-0.23800	0.00000	excluded	HepG2	U2AF2
SE	E2F6	ENSG00000169016.12	chr2	-	11597304	11597359	11593707	11593924	11605897	11606229	-0.41000	0.00000	excluded	K562	PUS1
SE	E2F6	ENSG00000169016.12	chr2	-	11590137	11590219	11587881	11587900	11591327	11591394	0.25700	0.00000	included	HepG2	SF3A3
SE	E2F6	ENSG00000169016.12	chr2	-	11591327	11591394	11587752	11587900	11593707	11593848	-0.69800	0.00035	excluded	HepG2	SF3A3
SE	E2F6	ENSG00000169016.12	chr2	-	11590137	11590212	11587752	11587900	11591327	11591822	-0.42800	0.00000	excluded	HepG2	SF3B4
SE	E2F6	ENSG00000169016.12	chr2	-	11595467	11595600	11593707	11593924	11597304	11597359	-0.28300	0.00039	excluded	K562	TARDBP
SE	E2F6	ENSG00000169016.12	chr2	-	11597304	11597359	11593707	11593924	11605897	11606272	0.28200	0.00022	included	HepG2	HNRNPC
A3SS	E2F6	ENSG00000169016.12	chr2	-	11586602	11586678	11586602	11586649	11587752	11587967	0.10600	0.00000	longer	K562	AQR
A3SS	E2F6	ENSG00000169016.12	chr2	-	11591776	11592007	11591776	11591932	11593707	11593848	0.09300	0.00000	longer	K562	AQR

Showing 1 to 10 of 29 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

E2F6

General Information

Functions

Localization

Domains (AlphaFold: E2F6)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for E2F6 is not avaliable on ENCORE database.

12 proteins are bound to E2F6 RNA:

eCLIP assay for E2F6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for E2F6 is not available on ENCORE database.

61 RBPs can affect the gene expression of E2F6 :

The Knockdown/knockout RNA-Seq assay for E2F6 is not available on ENCORE database.

22 RBPs can affect the splicing of E2F6 :

The Knockdown/knockout RNA-Seq assay for E2F6 is not avaliable on ENCORE database.