CDHR5

General Information

Gene Name : CDHR5
Gene ID : ENSG00000099834.18
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CDHR5)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CDHR5	ENSG00000099834.18	0.00	0.00	0.00	ENCSR000AEF
HepG2	CDHR5	ENSG00000099834.18	0.68	0.51	0.59	ENCSR985KAT
K562	CDHR5	ENSG00000099834.18	0.01	0.00	0.01	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CDHR5 is not avaliable on ENCORE database.

Proteins bound to RNA

CDHR5 RNA is bound by 7 proteins.

CanvasJS.com

eCLIP assay for CDHR5 is not avaliable on ENCORE database.

7 proteins are bound to CDHR5 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	618885	618894	-	3'-UTR,CDS,intron-Distal	6.72191	41.12338	K562	WRN
chr11	618894	618908	-	3'-UTR,CDS,intron-Distal	6.72191	41.12338	K562	WRN
chr11	618885	618893	-	3'-UTR,CDS,intron-Distal	7.53939	38.49114	K562	NSUN2
chr11	618893	618908	-	3'-UTR,CDS,intron-Distal	7.53939	38.49114	K562	NSUN2
chr11	618890	618908	-	3'-UTR,CDS,intron-Distal	4.62973	8.86385	K562	NPM1
chr11	618886	618890	-	3'-UTR,CDS,intron-Distal	4.62973	8.86385	K562	NPM1
chr11	618885	618908	-	3'-UTR,CDS,intron-Distal	4.92390	8.39621	K562	DDX3X
chr11	618885	618907	-	3'-UTR,CDS,intron-Distal	4.41183	5.09344	HepG2	XPO5
chr11	618890	618908	-	3'-UTR,CDS,intron-Distal	4.67705	4.91669	K562	TROVE2
chr11	618886	618890	-	3'-UTR,CDS,intron-Distal	4.67705	4.91669	K562	TROVE2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 12 entries

eCLIP assay for CDHR5 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for CDHR5 is not available on ENCORE database.
67 RBPs can affect the levels of CDHR5.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CDHR5 is not available on ENCORE database.

67 RBPs can affect the gene expression of CDHR5 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CDHR5	ENSG00000099834.14	589.50900	8.10380	6.18470	87.32280	84.69810	HepG2	SUPV3L1
CDHR5	ENSG00000099834.14	414.02610	22.27430	4.21620	64.85940	62.05750	HepG2	CIRBP
CDHR5	ENSG00000099834.14	414.57700	26.56380	3.96400	51.57840	49.98440	HepG2	ZNF622
CDHR5	ENSG00000099834.14	234.29910	17.70180	3.72630	41.19840	39.40140	HepG2	DKC1
CDHR5	ENSG00000099834.14	182.86800	10.37880	4.13900	38.22990	36.32590	HepG2	PUF60
CDHR5	ENSG00000099834.14	521.68930	26.13770	4.31890	34.87420	32.90620	HepG2	GPKOW
CDHR5	ENSG00000099834.14	132.36020	11.17250	3.56630	21.35120	19.00460	HepG2	RPS10
CDHR5	ENSG00000099834.14	129.15500	24.15270	2.41870	16.00770	14.59690	HepG2	UPF1
CDHR5	ENSG00000099834.14	97.99800	18.84470	2.37850	11.89750	10.77310	HepG2	PUS1
CDHR5	ENSG00000099834.14	96.82800	12.44850	2.95930	10.86520	9.97870	HepG2	SSB
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 67 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CDHR5

General Information

Functions

Localization

Domains (AlphaFold: CDHR5)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CDHR5 is not avaliable on ENCORE database.

7 proteins are bound to CDHR5 RNA:

eCLIP assay for CDHR5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CDHR5 is not available on ENCORE database.

67 RBPs can affect the gene expression of CDHR5 :

The Knockdown/knockout RNA-Seq assay for CDHR5 is not available on ENCORE database.

No RBPs affect the alternative splcing events of CDHR5 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for CDHR5 is not avaliable on ENCORE database.