C2CD2L

General Information

Gene Name : C2CD2L
Gene ID : ENSG00000172375.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: C2CD2L)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	C2CD2L	ENSG00000172375.13	1.72	4.99	3.35	ENCSR000AEF
HepG2	C2CD2L	ENSG00000172375.13	3.51	2.04	2.77	ENCSR985KAT
K562	C2CD2L	ENSG00000172375.13	25.09	19.95	22.52	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for C2CD2L is not avaliable on ENCORE database.

Proteins bound to RNA

C2CD2L RNA is bound by 10 proteins.

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eCLIP assay for C2CD2L is not avaliable on ENCORE database.

10 proteins are bound to C2CD2L RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	118986727	118986803	+	3'-UTR,CDS,intron-Proximal	4.76014	9.85896	K562	AQR
chr11	118983335	118983403	+	intron-Distal,intron-Proximal	4.85606	9.23542	K562	EFTUD2
chr11	118978800	118978886	+	CDS,intron-Proximal	4.76427	8.30573	K562	AQR
chr11	118987334	118987396	+	3'-UTR	3.65488	7.83682	K562	TIA1
chr11	118985078	118985190	+	intron-Distal,intron-Proximal	3.31083	7.18794	K562	AQR
chr11	118984416	118984526	+	CDS,intron-Proximal	4.81028	6.89468	HepG2	RBFOX2
chr11	118983343	118983442	+	CDS,intron-Distal,intron-Proximal	3.44907	6.40067	K562	PRPF8
chr11	118982335	118982382	+	CDS,intron-Proximal	5.06086	5.69951	K562	AQR
chr11	118983142	118983188	+	intron-Proximal	4.37685	5.32062	K562	EFTUD2
chr11	118983024	118983083	+	CDS,intron-Proximal	3.36226	5.24083	K562	U2AF2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 21 entries

eCLIP assay for C2CD2L is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for C2CD2L is not available on ENCORE database.
90 RBPs can affect the levels of C2CD2L.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for C2CD2L is not available on ENCORE database.

90 RBPs can affect the gene expression of C2CD2L :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
C2CD2L	ENSG00000172375.8	810.21420	307.60540	1.39710	24.82080	23.59230	HepG2	ZNF622
C2CD2L	ENSG00000172375.8	643.97200	235.18770	1.45310	17.10610	15.69170	HepG2	DDX3X
C2CD2L	ENSG00000172375.8	757.79380	239.89230	1.65930	16.44260	14.23930	HepG2	PABPC1
C2CD2L	ENSG00000172375.8	366.12000	189.25660	0.95190	10.20920	9.26510	HepG2	SRSF9
C2CD2L	ENSG00000172375.8	299.20230	140.36520	1.09180	10.04650	8.77260	HepG2	DNAJC21
C2CD2L	ENSG00000172375.8	366.91670	189.90840	0.95000	8.05690	7.11140	HepG2	PUF60
C2CD2L	ENSG00000172375.8	423.99320	231.85020	0.87070	7.88440	6.91260	HepG2	QKI
C2CD2L	ENSG00000172375.8	437.81240	225.48210	0.95720	7.53960	6.50820	HepG2	U2AF1
C2CD2L	ENSG00000172375.8	1309.54190	804.84500	0.70220	7.87330	6.26630	K562	EFTUD2
C2CD2L	ENSG00000172375.8	1413.66580	1877.66040	-0.40950	7.05550	5.96710	K562	UPF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 101 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for C2CD2L is not available on ENCORE database.

7 RBPs can affect the splicing of C2CD2L :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
RI	C2CD2L	ENSG00000172375.8	chr11	+	118984789	118987831	118984789	118985075	118986734	118987831	-0.62300	0.00000	0.00000	excluded	K562	AQR
SE	C2CD2L	ENSG00000172375.8	chr11	+	118981556	118981667	118981270	118981390	118981761	118981878	-0.16000	0.00001	0.00029	excluded	K562	HNRNPC
RI	C2CD2L	ENSG00000172375.8	chr11	+	118982230	118983102	118982230	118982339	118983037	118983102	0.23000	0.00042	0.08060	included	K562	LARP7
RI	C2CD2L	ENSG00000172375.8	chr11	+	118982230	118983102	118982230	118982339	118983037	118983102	0.18000	0.00164	0.01155	included	K562	PUS1
SE	C2CD2L	ENSG00000172375.8	chr11	+	118979893	118980064	118978092	118978805	118980813	118980909	-0.07000	0.00281	0.06854	excluded	K562	AKAP8L
SE	C2CD2L	ENSG00000172375.8	chr11	+	118979893	118980064	118978092	118978805	118980813	118980909	-0.07000	0.00282	0.03976	excluded	K562	PUS1
SE	C2CD2L	ENSG00000172375.8	chr11	+	118979893	118980064	118978092	118978805	118980813	118980909	-0.07000	0.00283	0.07328	excluded	K562	UTP18
RI	C2CD2L	ENSG00000172375.8	chr11	+	118982230	118983102	118982230	118982339	118983037	118983102	0.16600	0.00640	0.06353	included	K562	AGGF1
SE	C2CD2L	ENSG00000172375.8	chr11	+	118981556	118981667	118981270	118981390	118981761	118981878	-0.06600	0.00703	0.06144	excluded	K562	AQR
RI	C2CD2L	ENSG00000172375.8	chr11	+	118982230	118983102	118982230	118982339	118983037	118983102	0.14900	0.00768	0.06251	included	K562	AKAP8L

Showing 1 to 10 of 11 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

C2CD2L

General Information

Functions

Localization

Domains (AlphaFold: C2CD2L)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for C2CD2L is not avaliable on ENCORE database.

10 proteins are bound to C2CD2L RNA:

eCLIP assay for C2CD2L is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for C2CD2L is not available on ENCORE database.

90 RBPs can affect the gene expression of C2CD2L :

The Knockdown/knockout RNA-Seq assay for C2CD2L is not available on ENCORE database.

7 RBPs can affect the splicing of C2CD2L :

The Knockdown/knockout RNA-Seq assay for C2CD2L is not avaliable on ENCORE database.