ASIC4

General Information

Gene Name : ASIC4
Gene ID : ENSG00000072182.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ASIC4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ASIC4	ENSG00000072182.12	0.00	0.01	0.01	ENCSR000AEF
HepG2	ASIC4	ENSG00000072182.12	0.02	0.00	0.01	ENCSR985KAT
K562	ASIC4	ENSG00000072182.12	3.64	3.23	3.44	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ASIC4 is not avaliable on ENCORE database.

Proteins bound to RNA

ASIC4 RNA is bound by 24 proteins.

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eCLIP assay for ASIC4 is not avaliable on ENCORE database.

24 proteins are bound to ASIC4 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	220402457	220402461	+	CDS,intron-Proximal	6.71981	400.00000	K562	AQR
chr2	220402461	220402494	+	intron-Proximal	6.89015	400.00000	K562	AQR
chr2	220402494	220402501	+	intron-Proximal	7.39116	125.55680	K562	AQR
chr2	220402045	220402085	+	intron-Proximal	7.38795	88.64860	K562	AQR
chr2	220402090	220402147	+	intron-Distal,intron-Proximal	7.14309	84.80320	K562	AQR
chr2	220402320	220402353	+	intron-Proximal	6.75160	72.40770	K562	AQR
chr2	220402359	220402391	+	CDS	5.63635	68.95648	K562	AQR
chr2	220402654	220402669	+	CDS,intron-Proximal	6.06820	67.68820	K562	AQR
chr2	220402354	220402359	+	CDS	5.54881	63.31941	K562	AQR
chr2	220402669	220402711	+	CDS	5.63337	58.86951	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 81 entries

eCLIP assay for ASIC4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ASIC4 is not available on ENCORE database.
72 RBPs can affect the levels of ASIC4.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ASIC4 is not available on ENCORE database.

72 RBPs can affect the gene expression of ASIC4 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ASIC4	ENSG00000072182.8	729.78400	249.77040	1.54680	23.40400	20.29250	K562	EFTUD2
ASIC4	ENSG00000072182.8	726.25830	248.95000	1.54450	22.34430	19.60180	K562	UCHL5
ASIC4	ENSG00000072182.8	879.22360	413.98490	1.08660	21.24620	19.16360	K562	SF3A3
ASIC4	ENSG00000072182.8	823.17530	419.61480	0.97200	15.18720	13.63170	K562	NSUN2
ASIC4	ENSG00000072182.8	486.99510	183.72550	1.40630	15.81170	13.42770	K562	TIAL1
ASIC4	ENSG00000072182.8	707.82750	383.31030	0.88480	14.31610	12.94890	K562	DDX47
ASIC4	ENSG00000072182.8	813.12530	278.52880	1.54560	14.96720	12.58290	K562	CNOT7
ASIC4	ENSG00000072182.8	380.12120	154.75610	1.29640	13.32010	11.56290	K562	TARDBP
ASIC4	ENSG00000072182.8	824.54750	460.47790	0.84040	12.82180	10.94560	K562	HNRNPU
ASIC4	ENSG00000072182.8	717.15420	267.58600	1.42220	12.73560	10.14210	K562	PABPC1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 73 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ASIC4 is not available on ENCORE database.

4 RBPs can affect the splicing of ASIC4 :

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Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ASIC4	ENSG00000072182.8	chr2	+	220397984	220398130	220397036	220397199	220399892	220400046	-0.61600	0.00034	0.00684	excluded	K562	PUS1
SE	ASIC4	ENSG00000072182.8	chr2	+	220397984	220398130	220397036	220397199	220399892	220400046	-0.59400	0.00057	0.01773	excluded	K562	RBM15
SE	ASIC4	ENSG00000072182.8	chr2	+	220398039	220398284	220397036	220397199	220399892	220400046	-0.49700	0.00065	0.08522	excluded	K562	ZC3H8
SE	ASIC4	ENSG00000072182.8	chr2	+	220398039	220398284	220397036	220397199	220399892	220400046	-0.43300	0.00799	0.06794	excluded	K562	AQR

Showing 1 to 4 of 4 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ASIC4

General Information

Functions

Localization

Domains (AlphaFold: ASIC4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ASIC4 is not avaliable on ENCORE database.

24 proteins are bound to ASIC4 RNA:

eCLIP assay for ASIC4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ASIC4 is not available on ENCORE database.

72 RBPs can affect the gene expression of ASIC4 :

The Knockdown/knockout RNA-Seq assay for ASIC4 is not available on ENCORE database.

4 RBPs can affect the splicing of ASIC4 :

The Knockdown/knockout RNA-Seq assay for ASIC4 is not avaliable on ENCORE database.