UBQLN1

General Information

Gene Name : UBQLN1
Gene ID : ENSG00000135018.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: UBQLN1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	UBQLN1	ENSG00000135018.13	46.04	44.87	45.45	ENCSR000AEF
HepG2	UBQLN1	ENSG00000135018.13	49.89	70.71	60.30	ENCSR985KAT
K562	UBQLN1	ENSG00000135018.13	46.61	48.97	47.79	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for UBQLN1 is not avaliable on ENCORE database.

Proteins bound to RNA

UBQLN1 RNA is bound by 31 proteins.

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eCLIP assay for UBQLN1 is not avaliable on ENCORE database.

31 proteins are bound to UBQLN1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr9	86274967	86275049	-	3'-UTR,intron-Distal	7.54031	59.12703	K562	LIN28B
chr9	86275464	86275578	-	3'-UTR,intron-Distal	4.15064	22.25764	K562	UPF1
chr9	86297892	86297946	-	CDS,intron-Distal	4.24802	20.89005	K562	YBX3
chr9	86297879	86297892	-	CDS,intron-Distal	4.11963	18.80479	K562	YBX3
chr9	86306511	86306591	-	intron-Distal	5.25951	18.09430	K562	EXOSC5
chr9	86276626	86276666	-	3'-UTR,intron-Distal	3.76654	15.18522	K562	PUM2
chr9	86322709	86322811	-	5'-UTR,intron-Distal	3.97952	15.15746	HepG2	DDX3X
chr9	86291304	86291428	-	intron-Distal	6.54394	15.08232	K562	QKI
chr9	86304659	86304757	-	intron-Distal	5.88979	14.98801	K562	EXOSC5
chr9	86291340	86291425	-	intron-Distal	5.04870	13.93225	HepG2	QKI
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 93 entries

eCLIP assay for UBQLN1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for UBQLN1 is not available on ENCORE database.
87 RBPs can affect the levels of UBQLN1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for UBQLN1 is not available on ENCORE database.

87 RBPs can affect the gene expression of UBQLN1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
UBQLN1	ENSG00000135018.9	2832.41760	4645.95120	-0.71390	42.04030	39.73610	K562	NSUN2
UBQLN1	ENSG00000135018.9	952.35640	2675.42760	-1.49020	40.03710	37.75020	HepG2	NSUN2
UBQLN1	ENSG00000135018.9	5516.17200	3393.75610	0.70070	37.82470	36.40750	HepG2	ZNF622
UBQLN1	ENSG00000135018.9	2273.39100	3627.05300	-0.67400	22.96470	21.80280	HepG2	SSB
UBQLN1	ENSG00000135018.9	5258.95600	3508.51970	0.58380	20.19770	19.16740	HepG2	SRSF1
UBQLN1	ENSG00000135018.9	6438.45380	4294.46920	0.58410	20.14620	18.73160	K562	AGGF1
UBQLN1	ENSG00000135018.9	6722.20930	4317.94210	0.63850	17.17710	15.67800	K562	RBM15
UBQLN1	ENSG00000135018.9	1931.96130	3344.81930	-0.79190	16.75300	15.36210	K562	HNRNPC
UBQLN1	ENSG00000135018.9	1787.36380	2998.98070	-0.74660	13.13990	10.87630	K562	PSIP1
UBQLN1	ENSG00000135018.9	1784.48520	2603.64670	-0.54500	10.82660	9.41920	HepG2	PPIL4
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 106 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for UBQLN1 is not available on ENCORE database.

18 RBPs can affect the splicing of UBQLN1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	UBQLN1	ENSG00000135018.9	chr9	-	86281264	86281348	86279944	86280060	86284099	86284242	0.05900	0.00000	included	K562	SRSF1
SE	UBQLN1	ENSG00000135018.9	chr9	-	86281264	86281348	86279944	86280060	86284099	86284221	-0.19400	0.00000	excluded	HepG2	U2AF1
SE	UBQLN1	ENSG00000135018.9	chr9	-	86281264	86281348	86279944	86280060	86284099	86284242	0.08300	0.00000	included	HepG2	HNRNPM
SE	UBQLN1	ENSG00000135018.9	chr9	-	86281264	86281348	86279944	86280060	86284099	86284242	0.11500	0.00000	included	HepG2	HNRNPK
SE	UBQLN1	ENSG00000135018.9	chr9	-	86281264	86281348	86279944	86280060	86284099	86284242	-0.55800	0.00000	excluded	HepG2	U2AF2
SE	UBQLN1	ENSG00000135018.9	chr9	-	86281264	86281348	86279944	86280060	86284099	86284242	-0.22100	0.00000	excluded	HepG2	HNRNPA1
SE	UBQLN1	ENSG00000135018.9	chr9	-	86281264	86281348	86279944	86280060	86284099	86284221	-0.22900	0.00000	excluded	K562	U2AF1
SE	UBQLN1	ENSG00000135018.9	chr9	-	86281264	86281309	86279944	86280060	86284099	86284206	0.14000	0.00001	included	K562	HNRNPM
SE	UBQLN1	ENSG00000135018.9	chr9	-	86281264	86281348	86279944	86280060	86284099	86284221	-0.31900	0.00000	excluded	K562	U2AF2
SE	UBQLN1	ENSG00000135018.9	chr9	-	86281264	86281348	86279944	86280060	86284099	86284242	0.05900	0.00014	included	K562	HNRNPK

Showing 1 to 10 of 50 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

UBQLN1

General Information

Functions

Localization

Domains (AlphaFold: UBQLN1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for UBQLN1 is not avaliable on ENCORE database.

31 proteins are bound to UBQLN1 RNA:

eCLIP assay for UBQLN1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for UBQLN1 is not available on ENCORE database.

87 RBPs can affect the gene expression of UBQLN1 :

The Knockdown/knockout RNA-Seq assay for UBQLN1 is not available on ENCORE database.

18 RBPs can affect the splicing of UBQLN1 :

The Knockdown/knockout RNA-Seq assay for UBQLN1 is not avaliable on ENCORE database.