TGFBR3

General Information

Gene Name : TGFBR3
Gene ID : ENSG00000069702.10
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TGFBR3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TGFBR3	ENSG00000069702.10	14.21	10.48	12.35	ENCSR000AEF
HepG2	TGFBR3	ENSG00000069702.10	52.28	72.67	62.48	ENCSR985KAT
K562	TGFBR3	ENSG00000069702.10	16.53	21.79	19.16	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TGFBR3 is not avaliable on ENCORE database.

Proteins bound to RNA

TGFBR3 RNA is bound by 44 proteins.

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eCLIP assay for TGFBR3 is not avaliable on ENCORE database.

44 proteins are bound to TGFBR3 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	92185707	92185786	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.72003	400.00000	HepG2	SND1
chr1	92351614	92351690	-	5'-UTR,intron-Distal,intron-Proximal	5.16357	400.00000	HepG2	DDX3X
chr1	92351432	92351493	-	5'-UTR,intron-Distal,intron-Proximal	5.21128	400.00000	HepG2	DDX3X
chr1	92351555	92351614	-	5'-UTR,intron-Distal,intron-Proximal	5.07920	400.00000	HepG2	DDX3X
chr1	92351493	92351552	-	5'-UTR,intron-Distal,intron-Proximal	4.62073	400.00000	HepG2	DDX3X
chr1	92185658	92185707	-	3'-UTR,CDS,intron-Distal	4.98836	83.23970	HepG2	SND1
chr1	92146310	92146407	-	3'-UTR,intron-Distal,intron-Proximal	4.42341	42.04743	HepG2	FUBP3
chr1	92185679	92185762	-	3'-UTR,CDS,intron-Distal	3.52934	35.60676	HepG2	RPS3
chr1	92146163	92146217	-	3'-UTR,intron-Distal	4.49536	34.89083	HepG2	DDX55
chr1	92145925	92146014	-	3'-UTR,intron-Distal	4.36106	32.41795	HepG2	FUBP3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 205 entries

eCLIP assay for TGFBR3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TGFBR3 is not available on ENCORE database.
155 RBPs can affect the levels of TGFBR3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TGFBR3 is not available on ENCORE database.

155 RBPs can affect the gene expression of TGFBR3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TGFBR3	ENSG00000069702.6	1249.17570	11054.29780	-3.14560	99999.99999	99999.99999	HepG2	RBM22
TGFBR3	ENSG00000069702.6	1850.91720	10840.09240	-2.55010	99999.99999	99999.99999	HepG2	SSB
TGFBR3	ENSG00000069702.6	2120.24100	10809.06290	-2.34990	99999.99999	99999.99999	HepG2	SUCLG1
TGFBR3	ENSG00000069702.6	719.77160	8225.34540	-3.51450	253.86650	250.27710	HepG2	HNRNPA1
TGFBR3	ENSG00000069702.6	3341.34950	12485.34210	-1.90170	241.29690	238.58170	HepG2	SRFBP1
TGFBR3	ENSG00000069702.6	1399.56140	8831.47670	-2.65770	212.93700	209.81450	HepG2	TIAL1
TGFBR3	ENSG00000069702.6	2323.96540	8332.45840	-1.84220	196.10950	193.81630	HepG2	SRSF1
TGFBR3	ENSG00000069702.6	924.20280	7350.00220	-2.99150	188.43710	184.67030	HepG2	DDX21
TGFBR3	ENSG00000069702.6	1265.94080	9149.13440	-2.85340	180.03490	175.94690	HepG2	HNRNPC
TGFBR3	ENSG00000069702.6	2323.89220	8533.29710	-1.87660	177.85760	175.27990	HepG2	NELFE
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 190 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TGFBR3 is not available on ENCORE database.

6 RBPs can affect the splicing of TGFBR3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TGFBR3	ENSG00000069702.6	chr1	-	92224169	92224307			92200332	92200516	92262843	92263028	-0.06000	0.00000	0.00020	excluded	HepG2	SF3A3
SE	TGFBR3	ENSG00000069702.6	chr1	-	92251742	92251784			92224169	92224307	92262843	92263028	0.08100	0.00000	0.00031	included	HepG2	TIAL1
SE	TGFBR3	ENSG00000069702.6	chr1	-	92224169	92224307			92200332	92200516	92262843	92263028	-0.11100	0.00000	0.00000	excluded	HepG2	SF3B4
SE	TGFBR3	ENSG00000069702.6	chr1	-	92266515	92266612			92262843	92263028	92327027	92327201	0.09200	0.00079	0.03198	included	HepG2	HNRNPC
SE	TGFBR3	ENSG00000069702.6	chr1	-	92224169	92224307			92200332	92200516	92262843	92263028	-0.07300	0.00090	0.07438	excluded	HepG2	PRPF8
MXE	TGFBR3	ENSG00000069702.6	chr1	-	92224169	92224307	92262843	92263028	92200332	92200516	92327027	92327201	0.06100	0.00247	0.01739	1included	HepG2	U2AF2
SE	TGFBR3	ENSG00000069702.6	chr1	-	92251742	92251784			92224169	92224307	92262843	92263028	0.08900	0.00806	0.09987	included	K562	HNRNPC

Showing 1 to 7 of 7 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TGFBR3

General Information

Functions

Localization

Domains (AlphaFold: TGFBR3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TGFBR3 is not avaliable on ENCORE database.

44 proteins are bound to TGFBR3 RNA:

eCLIP assay for TGFBR3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TGFBR3 is not available on ENCORE database.

155 RBPs can affect the gene expression of TGFBR3 :

The Knockdown/knockout RNA-Seq assay for TGFBR3 is not available on ENCORE database.

6 RBPs can affect the splicing of TGFBR3 :

The Knockdown/knockout RNA-Seq assay for TGFBR3 is not avaliable on ENCORE database.