PHF14

General Information

Gene Name : PHF14
Gene ID : ENSG00000106443.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PHF14)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PHF14	ENSG00000106443.16	20.01	19.73	19.87	ENCSR000AEF
HepG2	PHF14	ENSG00000106443.16	28.79	34.25	31.52	ENCSR985KAT
K562	PHF14	ENSG00000106443.16	22.63	27.85	25.24	ENCSR000AEO

Assays

1 Released experiments are available on ENCORE database.

Assay Type	Exp_Name	ENCODE ID	Target label	Biosample	Status	Linked Antibody	Controls	Method	Note
knockdown followed by RNA-seq	PHF14-BGRSLV06-RS293		PHF14	Ribo-STAMP-293T	Released			shRNA	KD% = ,

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project	Note
PHF14	Ribo-STAMP-293T	shRNA			BGRSLV04-33,BGRSLV04-34	BGRSLV04-1,BGRSLV04-2		NotSatisfied	ENCORE2
PHF14	Ribo-STAMP-293T	shRNA			PHF14-BGRSLV06-13,PHF14-BGRSLV06-14	NT-BGRSLV06-1,NT-BGRSLV06-2	,	Released	ENCORE2

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PHF14 is not avaliable on ENCORE database.

Proteins bound to RNA

PHF14 RNA is bound by 42 proteins.

CanvasJS.com

eCLIP assay for PHF14 is not avaliable on ENCORE database.

42 proteins are bound to PHF14 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	11109252	11109344	+	intron-Distal	6.95366	60.62436	HepG2	PCBP2
chr7	11022587	11022721	+	CDS,intron-Distal	4.34871	37.65012	K562	UCHL5
chr7	11022697	11022788	+	CDS,intron-Distal,intron-Proximal	7.24771	36.53161	HepG2	BCLAF1
chr7	11022651	11022783	+	CDS,intron-Distal	5.01823	28.00008	K562	ZNF622
chr7	11022245	11022377	+	CDS,intron-Distal	4.91960	27.74139	K562	UCHL5
chr7	11022582	11022697	+	CDS,intron-Distal	5.86743	24.83941	HepG2	BCLAF1
chr7	11022589	11022769	+	CDS,intron-Distal	3.00355	22.87693	HepG2	BUD13
chr7	11022721	11022779	+	CDS,intron-Distal	4.53039	17.85310	K562	UCHL5
chr7	11154414	11154441	+	intron-Distal	5.21979	17.74953	HepG2	HNRNPL
chr7	11101406	11101461	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.04146	17.47662	HepG2	U2AF2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 252 entries

eCLIP assay for PHF14 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PHF14 is not available on ENCORE database.
88 RBPs can affect the levels of PHF14.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PHF14 is not available on ENCORE database.

88 RBPs can affect the gene expression of PHF14 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PHF14	ENSG00000106443.10	1009.97440	1672.42760	-0.72760	21.98280	20.80210	HepG2	ZNF622
PHF14	ENSG00000106443.10	893.69810	1468.13130	-0.71610	16.46510	15.18510	HepG2	UTP3
PHF14	ENSG00000106443.10	577.19340	946.70070	-0.71390	12.70410	11.62150	HepG2	TRIM56
PHF14	ENSG00000106443.10	1044.89240	1812.81750	-0.79490	12.95960	11.21930	K562	GPKOW
PHF14	ENSG00000106443.10	1251.25430	2059.12130	-0.71870	10.25650	9.23680	K562	AQR
PHF14	ENSG00000106443.10	1164.23280	1939.12640	-0.73600	10.98340	9.16790	K562	FIP1L1
PHF14	ENSG00000106443.10	1328.48170	1882.60390	-0.50300	8.61530	7.45230	K562	EIF2S2
PHF14	ENSG00000106443.10	893.03890	1288.05300	-0.52840	8.25480	7.34740	K562	AGGF1
PHF14	ENSG00000106443.10	718.04060	1118.74770	-0.63970	7.64890	6.70310	K562	HNRNPC
PHF14	ENSG00000106443.10	682.97470	1449.02570	-1.08520	7.50370	6.53150	HepG2	DDX6
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 102 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PHF14 is not available on ENCORE database.

21 RBPs can affect the splicing of PHF14 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	PHF14	ENSG00000106443.10	chr7	+	11101417	11101468	11091238	11091407	11101590	11101712	-0.26100	0.00000	excluded	K562	SRSF1
SE	PHF14	ENSG00000106443.10	chr7	+	11021998	11022786	11014461	11014572	11030329	11030474	-0.32300	0.00000	excluded	K562	SF3B4
SE	PHF14	ENSG00000106443.10	chr7	+	11101417	11101468	11091238	11091407	11101590	11101712	-0.38200	0.00000	excluded	HepG2	RBM22
SE	PHF14	ENSG00000106443.10	chr7	+	11078386	11078482	11076611	11076718	11080298	11080402	-0.14600	0.00000	excluded	HepG2	U2AF1
SE	PHF14	ENSG00000106443.10	chr7	+	11078386	11078482	11076611	11076718	11080298	11080402	-0.16600	0.00000	excluded	HepG2	U2AF2
SE	PHF14	ENSG00000106443.10	chr7	+	11101417	11101468	11091238	11091407	11101590	11101712	-0.21600	0.00000	excluded	K562	AQR
SE	PHF14	ENSG00000106443.10	chr7	+	11101417	11101468	11091238	11091407	11101590	11101712	-0.25100	0.00002	excluded	HepG2	SRSF1
SE	PHF14	ENSG00000106443.10	chr7	+	11101417	11101468	11091238	11091407	11101590	11101712	0.10800	0.00071	included	HepG2	SSB
SE	PHF14	ENSG00000106443.10	chr7	+	11078386	11078482	11076611	11076718	11080298	11080402	-0.36300	0.00000	excluded	K562	U2AF2
SE	PHF14	ENSG00000106443.10	chr7	+	11101417	11101468	11091238	11091407	11101590	11101712	0.17400	0.00044	included	HepG2	HNRNPU

Showing 1 to 10 of 33 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PHF14

General Information

Functions

Localization

Domains (AlphaFold: PHF14)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PHF14 is not avaliable on ENCORE database.

42 proteins are bound to PHF14 RNA:

eCLIP assay for PHF14 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PHF14 is not available on ENCORE database.

88 RBPs can affect the gene expression of PHF14 :

The Knockdown/knockout RNA-Seq assay for PHF14 is not available on ENCORE database.

21 RBPs can affect the splicing of PHF14 :

The Knockdown/knockout RNA-Seq assay for PHF14 is not avaliable on ENCORE database.