GOLGA8B

General Information

Gene Name : GOLGA8B
Gene ID : ENSG00000215252.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: GOLGA8B)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	GOLGA8B	ENSG00000215252.11	90.60	92.08	91.34	ENCSR000AEF
HepG2	GOLGA8B	ENSG00000215252.11	51.16	69.19	60.17	ENCSR985KAT
K562	GOLGA8B	ENSG00000215252.11	45.56	56.78	51.17	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for GOLGA8B is not avaliable on ENCORE database.

Proteins bound to RNA

GOLGA8B RNA is bound by 20 proteins.

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eCLIP assay for GOLGA8B is not avaliable on ENCORE database.

20 proteins are bound to GOLGA8B RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr15	34837577	34837630	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.48463	23.46291	HepG2	BCLAF1
chr15	34817546	34817654	-	3'-UTR,intron-Distal	3.98255	21.05942	HepG2	ZC3H11A
chr15	34818958	34819026	-	3'-UTR,intron-Distal	4.21274	18.62565	HepG2	EIF3H
chr15	34817635	34817719	-	3'-UTR,intron-Distal	4.11057	17.74263	K562	ZC3H11A
chr15	34817559	34817649	-	3'-UTR,intron-Distal	5.11189	15.30868	HepG2	LSM11
chr15	34818968	34819058	-	3'-UTR,intron-Distal	4.12469	15.03893	HepG2	HLTF
chr15	34817561	34817635	-	3'-UTR,intron-Distal	6.41840	14.28535	K562	ZC3H11A
chr15	34845148	34845265	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	4.01881	13.94470	K562	UCHL5
chr15	34817988	34818076	-	3'-UTR,intron-Distal	4.41466	13.53996	HepG2	EIF3H
chr15	34817527	34817672	-	3'-UTR,intron-Distal	3.41978	13.31093	HepG2	PABPN1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 87 entries

eCLIP assay for GOLGA8B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for GOLGA8B is not available on ENCORE database.
104 RBPs can affect the levels of GOLGA8B.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for GOLGA8B is not available on ENCORE database.

104 RBPs can affect the gene expression of GOLGA8B :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
GOLGA8B	ENSG00000215252.7	7369.54240	2843.30340	1.37390	78.10840	75.66140	HepG2	TAF15
GOLGA8B	ENSG00000215252.7	8271.96050	3152.01420	1.39190	74.07870	71.69070	HepG2	QKI
GOLGA8B	ENSG00000215252.7	5191.37260	1802.66740	1.52590	57.89410	54.84470	HepG2	FUBP3
GOLGA8B	ENSG00000215252.7	3595.11070	1607.09060	1.16150	28.31430	26.34110	HepG2	NSUN2
GOLGA8B	ENSG00000215252.7	6677.57120	3023.24770	1.14310	24.55970	22.91160	HepG2	EIF2S1
GOLGA8B	ENSG00000215252.7	1312.13290	2601.31350	-0.98730	24.40830	22.29460	K562	SRSF1
GOLGA8B	ENSG00000215252.7	3431.97380	6466.29620	-0.91390	23.51510	22.00690	HepG2	PUF60
GOLGA8B	ENSG00000215252.7	7006.96610	3319.77380	1.07760	23.61310	21.17680	HepG2	G3BP2
GOLGA8B	ENSG00000215252.7	9405.46010	6533.54500	0.52550	21.69490	20.63840	HepG2	SRFBP1
GOLGA8B	ENSG00000215252.7	3355.62060	4980.96640	-0.56980	19.19000	17.83190	HepG2	UTP3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 119 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for GOLGA8B is not available on ENCORE database.

4 RBPs can affect the splicing of GOLGA8B :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	GOLGA8B	ENSG00000215252.7	chr15	-	34867025	34867115	34845945	34846157	34875716	34875835	-0.29500	0.00000	0.00171	excluded	HepG2	NOLC1
SE	GOLGA8B	ENSG00000215252.7	chr15	-	34867025	34867115	34845945	34846157	34875716	34875835	-0.16200	0.00006	0.03470	excluded	K562	IGF2BP2
SE	GOLGA8B	ENSG00000215252.7	chr15	-	34867025	34867115	34845945	34846157	34875716	34875835	0.09800	0.00068	0.04483	included	HepG2	FTO
A3SS	GOLGA8B	ENSG00000215252.7	chr15	-	34845173	34845347	34845173	34845292	34845945	34846157	0.08400	0.00522	0.03000	longer	K562	AQR

Showing 1 to 4 of 4 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

GOLGA8B

General Information

Functions

Localization

Domains (AlphaFold: GOLGA8B)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for GOLGA8B is not avaliable on ENCORE database.

20 proteins are bound to GOLGA8B RNA:

eCLIP assay for GOLGA8B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for GOLGA8B is not available on ENCORE database.

104 RBPs can affect the gene expression of GOLGA8B :

The Knockdown/knockout RNA-Seq assay for GOLGA8B is not available on ENCORE database.

4 RBPs can affect the splicing of GOLGA8B :

The Knockdown/knockout RNA-Seq assay for GOLGA8B is not avaliable on ENCORE database.