DPH1

General Information

Gene Name : DPH1
Gene ID : ENSG00000108963.17
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: DPH1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	DPH1	ENSG00000108963.17	4.46	10.92	7.69	ENCSR000AEF
HepG2	DPH1	ENSG00000108963.17	24.23	13.73	18.98	ENCSR985KAT
K562	DPH1	ENSG00000108963.17	22.37	19.31	20.84	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for DPH1 is not avaliable on ENCORE database.

Proteins bound to RNA

DPH1 RNA is bound by 26 proteins.

CanvasJS.com

eCLIP assay for DPH1 is not avaliable on ENCORE database.

26 proteins are bound to DPH1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	1945609	1945726	+	3'-UTR,intron-Distal,intron-Proximal	4.61522	13.53114	HepG2	PCBP2
chr17	1945840	1945931	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.20308	11.35884	HepG2	BUD13
chr17	1945196	1945216	+	3'-UTR,5'-UTR,intron-Proximal	4.51834	11.31344	K562	AQR
chr17	1944815	1944905	+	3'-UTR,CDS	4.53569	10.48252	HepG2	PPIG
chr17	1945866	1945933	+	3'-UTR,CDS,intron-Distal,intron-Proximal	5.72183	9.95272	K562	AQR
chr17	1945564	1945763	+	3'-UTR,intron-Distal,intron-Proximal	3.68047	9.80262	HepG2	HNRNPK
chr17	1939342	1939394	+	CDS,intron-Distal,intron-Proximal	5.28395	9.35884	HepG2	PPIG
chr17	1938347	1938402	+	intron-Distal,intron-Proximal	4.20924	9.31613	HepG2	CSTF2T
chr17	1944628	1944708	+	intron-Distal,intron-Proximal	4.48078	9.07264	HepG2	XPO5
chr17	1946055	1946116	+	3'-UTR,CDS,intron-Distal	5.18267	9.03040	K562	RBM15
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 86 entries

eCLIP assay for DPH1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for DPH1 is not available on ENCORE database.
73 RBPs can affect the levels of DPH1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for DPH1 is not available on ENCORE database.

73 RBPs can affect the gene expression of DPH1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
DPH1	ENSG00000108963.13	816.81970	469.68080	0.79820	14.86270	13.57650	HepG2	CKAP4
DPH1	ENSG00000108963.13	662.59320	337.79410	0.97190	13.84410	12.87330	HepG2	TIAL1
DPH1	ENSG00000108963.13	286.51350	536.88790	-0.90600	12.90410	11.62880	HepG2	ZC3H8
DPH1	ENSG00000108963.13	972.31330	481.78450	1.01290	11.17230	9.96550	HepG2	MATR3
DPH1	ENSG00000108963.13	536.38790	857.64330	-0.67710	10.55380	9.74580	HepG2	SRFBP1
DPH1	ENSG00000108963.13	842.63010	458.70190	0.87720	8.62820	7.54020	HepG2	GPKOW
DPH1	ENSG00000108963.13	742.84470	474.05980	0.64790	8.43340	7.47900	HepG2	UTP3
DPH1	ENSG00000108963.13	548.67670	340.87120	0.68660	8.14390	7.25710	HepG2	TRIM56
DPH1	ENSG00000108963.13	780.06720	540.02730	0.53050	7.42560	6.64190	HepG2	ZNF622
DPH1	ENSG00000108963.13	1018.27880	553.66870	0.87890	7.46410	6.32010	HepG2	SF3A3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 79 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for DPH1 is not available on ENCORE database.

15 RBPs can affect the splicing of DPH1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A5SS	DPH1	ENSG00000108963.13	chr17	+	1944396	1944524	1944396	1944475	1944774	1944915	0.41500	0.00000	0.00012	longer	HepG2	TAF15
RI	DPH1	ENSG00000108963.13	chr17	+	1939263	1939980	1939263	1939385	1939822	1939980	0.13100	0.00000	0.00007	included	HepG2	U2AF2
RI	DPH1	ENSG00000108963.13	chr17	+	1943511	1943899	1943511	1943668	1943798	1943899	0.23700	0.00002	0.00101	included	HepG2	G3BP1
A5SS	DPH1	ENSG00000108963.13	chr17	+	1939822	1939980	1939822	1939947	1940128	1940250	0.23700	0.00007	0.02213	longer	K562	DROSHA
A5SS	DPH1	ENSG00000108963.13	chr17	+	1939822	1939980	1939822	1939947	1940128	1940250	-0.24700	0.00017	0.02659	shorter	HepG2	QKI
A5SS	DPH1	ENSG00000108963.13	chr17	+	1939822	1939980	1939822	1939947	1940128	1940250	0.26900	0.00025	0.02894	longer	K562	FXR1
RI	DPH1	ENSG00000108963.13	chr17	+	1939263	1939980	1939263	1939385	1939822	1939980	0.07000	0.00064	0.02645	included	K562	SF3B1
RI	DPH1	ENSG00000108963.13	chr17	+	1945061	1946718	1945061	1945169	1945898	1946718	0.36300	0.00066	0.06201	included	K562	PUM1
RI	DPH1	ENSG00000108963.13	chr17	+	1939263	1939980	1939263	1939385	1939822	1939980	0.15300	0.00087	0.01195	included	HepG2	HNRNPK
RI	DPH1	ENSG00000108963.13	chr17	+	1945061	1946718	1945061	1945169	1945898	1946718	-0.47400	0.00120	0.09146	excluded	K562	UCHL5

Showing 1 to 10 of 16 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

DPH1

General Information

Functions

Localization

Domains (AlphaFold: DPH1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for DPH1 is not avaliable on ENCORE database.

26 proteins are bound to DPH1 RNA:

eCLIP assay for DPH1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for DPH1 is not available on ENCORE database.

73 RBPs can affect the gene expression of DPH1 :

The Knockdown/knockout RNA-Seq assay for DPH1 is not available on ENCORE database.

15 RBPs can affect the splicing of DPH1 :

The Knockdown/knockout RNA-Seq assay for DPH1 is not avaliable on ENCORE database.