DDHD2

General Information

Gene Name : DDHD2
Gene ID : ENSG00000085788.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: DDHD2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	DDHD2	ENSG00000085788.13	52.32	28.18	40.25	ENCSR000AEF
HepG2	DDHD2	ENSG00000085788.13	33.59	36.98	35.28	ENCSR985KAT
K562	DDHD2	ENSG00000085788.13	34.28	32.76	33.52	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for DDHD2 is not avaliable on ENCORE database.

Proteins bound to RNA

DDHD2 RNA is bound by 20 proteins.

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eCLIP assay for DDHD2 is not avaliable on ENCORE database.

20 proteins are bound to DDHD2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	38120092	38120143	+	3'-UTR,intron-Distal	4.55304	22.96202	K562	PUM2
chr8	38120143	38120192	+	3'-UTR,intron-Distal	4.21400	20.67847	K562	PUM2
chr8	38096453	38096534	+	intron-Distal	6.12029	18.79061	K562	KHSRP
chr8	38095141	38095229	+	3'-UTR,CDS,intron-Proximal	3.95897	16.64610	K562	AQR
chr8	38090586	38090697	+	5'-UTR,CDS,intron-Proximal	4.12465	13.79507	K562	PUM2
chr8	38103212	38103295	+	3'-UTR,CDS,intron-Proximal	4.16871	11.37858	K562	SF3B4
chr8	38110239	38110333	+	5'-UTR,CDS,intron-Proximal	5.58355	10.71076	HepG2	BCLAF1
chr8	38110475	38110650	+	CDS,intron-Proximal	3.28417	10.67070	HepG2	BCLAF1
chr8	38107225	38107322	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.65955	10.65310	HepG2	BCLAF1
chr8	38117555	38117603	+	CDS,intron-Proximal	4.09311	9.80976	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 56 entries

eCLIP assay for DDHD2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for DDHD2 is not available on ENCORE database.
112 RBPs can affect the levels of DDHD2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for DDHD2 is not available on ENCORE database.

112 RBPs can affect the gene expression of DDHD2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
DDHD2	ENSG00000085788.9	789.33840	1820.70770	-1.20580	28.85130	27.20090	HepG2	PUF60
DDHD2	ENSG00000085788.9	721.79740	1442.93620	-0.99930	28.01340	26.41000	HepG2	UTP3
DDHD2	ENSG00000085788.9	2442.61320	4970.38210	-1.02490	25.11730	22.59670	K562	PUF60
DDHD2	ENSG00000085788.9	893.19280	1524.42310	-0.77120	21.96650	20.48990	HepG2	CKAP4
DDHD2	ENSG00000085788.9	1588.36660	2572.98500	-0.69590	17.47270	16.06490	K562	FXR1
DDHD2	ENSG00000085788.9	2542.93030	1641.88550	0.63100	13.89070	12.77700	HepG2	TAF15
DDHD2	ENSG00000085788.9	3248.89730	2291.93990	0.50330	13.65240	12.76540	HepG2	SRFBP1
DDHD2	ENSG00000085788.9	1095.44410	1651.90170	-0.59260	12.08970	10.96380	HepG2	PCBP1
DDHD2	ENSG00000085788.9	1911.38280	2938.05800	-0.62020	11.77210	9.93370	K562	SF3B4
DDHD2	ENSG00000085788.9	1261.80220	1826.62460	-0.53370	10.66660	9.87070	HepG2	SRSF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 130 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for DDHD2 is not available on ENCORE database.

10 RBPs can affect the splicing of DDHD2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	DDHD2	ENSG00000085788.9	chr8	+	38097792	38097882			38095624	38095727	38099767	38099903	-0.14800	0.00004	0.00126	excluded	K562	U2AF2
SE	DDHD2	ENSG00000085788.9	chr8	+	38097792	38097882			38095624	38095727	38099767	38099903	-0.12500	0.00007	0.06638	excluded	K562	PABPC4
SE	DDHD2	ENSG00000085788.9	chr8	+	38105230	38105353			38103750	38103818	38107225	38107321	-0.05200	0.00075	0.01645	excluded	K562	SRSF1
SE	DDHD2	ENSG00000085788.9	chr8	+	38097792	38097882			38095606	38095727	38099767	38099903	-0.09500	0.00120	0.03209	excluded	K562	AGGF1
SE	DDHD2	ENSG00000085788.9	chr8	+	38097792	38097882			38095606	38095727	38099767	38099903	-0.08900	0.00129	0.02107	excluded	K562	PUS1
SE	DDHD2	ENSG00000085788.9	chr8	+	38118117	38118344			38117557	38117665	38119055	38119117	-0.09900	0.00196	0.03337	excluded	K562	HNRNPC
SE	DDHD2	ENSG00000085788.9	chr8	+	38091911	38092028			38090504	38090732	38095055	38095140	-0.05900	0.00200	0.03667	excluded	K562	SF3B4
SE	DDHD2	ENSG00000085788.9	chr8	+	38091911	38092028			38090504	38090732	38095055	38095140	-0.06400	0.00218	0.02357	excluded	K562	AQR
SE	DDHD2	ENSG00000085788.9	chr8	+	38097792	38097882			38095606	38095727	38099767	38099903	-0.12500	0.00269	0.05755	excluded	K562	RBM15
MXE	DDHD2	ENSG00000085788.9	chr8	+	38103750	38103818	38105230	38105353	38103259	38103468	38107225	38107265	-0.15700	0.00370	0.09299	2included	HepG2	NCBP2

Showing 1 to 10 of 11 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

DDHD2

General Information

Functions

Localization

Domains (AlphaFold: DDHD2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for DDHD2 is not avaliable on ENCORE database.

20 proteins are bound to DDHD2 RNA:

eCLIP assay for DDHD2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for DDHD2 is not available on ENCORE database.

112 RBPs can affect the gene expression of DDHD2 :

The Knockdown/knockout RNA-Seq assay for DDHD2 is not available on ENCORE database.

10 RBPs can affect the splicing of DDHD2 :

The Knockdown/knockout RNA-Seq assay for DDHD2 is not avaliable on ENCORE database.