ZFP62

General Information

Gene Name       : ZFP62
Gene ID             : ENSG00000196670.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZFP62)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZFP62ENSG00000196670.1320.3214.8617.59ENCSR000AEF
HepG2ZFP62ENSG00000196670.1310.3112.1011.21ENCSR985KAT
K562ZFP62ENSG00000196670.1315.6416.7916.21ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZFP62 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZFP62 RNA is bound by 8 proteins.  







eCLIP assay for ZFP62 is not avaliable on ENCORE database.





8 proteins are bound to ZFP62 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5180274648180274788-3'-UTR,intron-Distal3.484898.29127K562CPSF6
chr5180288174180288218-5'-UTR,intron-Distal5.5608626.03057K562AQR
chr5180288214180288218-5'-UTR,intron-Distal4.130746.24305HepG2AQR
chr5180288199180288219-5'-UTR,CDS,intron-Distal4.101913.18234K562BUD13
chr5180277891180277994-CDS,intron-Distal,intron-Proximal3.170817.93618K562UCHL5
chr5180277685180277728-CDS,intron-Distal3.992745.77244K562UCHL5
chr5180277285180277430-CDS,intron-Distal5.235568.27957HepG2HLTF
chr5180277327180277378-CDS,intron-Distal3.318786.02234K562UCHL5
chr5180278128180278249-CDS,intron-Distal,intron-Proximal3.042204.81357K562SAFB2
chr5180277898180277976-CDS,intron-Distal,intron-Proximal3.298923.86112K562SAFB2
chr5180278145180278214-CDS,intron-Distal,intron-Proximal4.539735.33445HepG2HLTF
chr5180277728180277786-CDS,intron-Distal3.350856.02234K562UCHL5
chr5180286084180286153-intron-Distal3.601883.34940K562HNRNPM
chr5180288098180288156-intron-Distal4.753897.53589K562AQR
chr5180288179180288191-intron-Distal4.256276.92290HepG2AQR
chr5180288172180288199-intron-Distal4.133983.18234K562BUD13
chr5180288192180288214-intron-Distal4.256276.92290HepG2AQR
chr5180288013180288098-intron-Distal4.6186010.54823K562AQR
chr5180286343180286499-intron-Distal3.019573.65621HepG2HNRNPL
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZFP62 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZFP62 is not available on ENCORE database.

  • 63 RBPs can affect the levels of ZFP62.  








The Knockdown/knockout RNA-Seq assay for ZFP62 is not available on ENCORE database.





63 RBPs can affect the gene expression of ZFP62 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZFP62ENSG00000196670.9526.16910644.22600-0.292002.080101.46920HepG2AUH
ZFP62ENSG00000196670.9516.52190369.072800.484802.863602.16650HepG2CPSF6
ZFP62ENSG00000196670.9264.04180387.48150-0.553402.701102.09120HepG2DDX6
ZFP62ENSG00000196670.9222.24610330.27370-0.571504.431803.64070HepG2DNAJC2
ZFP62ENSG00000196670.9350.56950249.746500.489102.727001.94650HepG2FUBP3
ZFP62ENSG00000196670.9201.53390293.23290-0.541002.653601.77680HepG2GEMIN5
ZFP62ENSG00000196670.9476.76400354.020100.429302.285301.60280HepG2NSUN2
ZFP62ENSG00000196670.9168.77000352.94260-1.064406.040404.69200HepG2PABPC1
ZFP62ENSG00000196670.9480.52520369.385600.379402.781102.17350HepG2PCBP1
ZFP62ENSG00000196670.9464.64120375.884100.305701.918401.44690HepG2PTBP1
ZFP62ENSG00000196670.9422.57340536.36480-0.344002.257801.64940HepG2PUM2
ZFP62ENSG00000196670.9590.69500407.048200.537104.172603.42700HepG2QKI
ZFP62ENSG00000196670.9865.90000618.222000.486005.202104.54720HepG2RBM22
ZFP62ENSG00000196670.9534.56470418.305900.353702.424601.91260HepG2NELFE
ZFP62ENSG00000196670.9511.99820389.626000.393902.875802.24900HepG2RECQL
ZFP62ENSG00000196670.9484.91090391.307200.309301.901901.39630HepG2SF3B4
ZFP62ENSG00000196670.9435.87640332.312800.391302.892202.33070HepG2SRSF9
ZFP62ENSG00000196670.9509.10400367.176800.471402.823602.25770HepG2TAF15
ZFP62ENSG00000196670.9430.44240337.341400.351502.060201.33620HepG2TIA1
ZFP62ENSG00000196670.9222.83110364.39440-0.709606.194305.41140HepG2TRIM56
ZFP62ENSG00000196670.9345.33460461.39090-0.418003.064102.33720HepG2UPF1
ZFP62ENSG00000196670.9322.85720507.43990-0.652307.536306.74880HepG2ZNF622
ZFP62ENSG00000196670.9680.327001236.21480-0.8616019.1734017.79750K562AGGF1
ZFP62ENSG00000196670.9973.073001358.30940-0.481205.065403.63810K562AKAP8
ZFP62ENSG00000196670.9681.599701286.31200-0.9162011.179109.74530K562AKAP8L
ZFP62ENSG00000196670.91221.093201467.66730-0.265402.824102.16550K562DDX47
ZFP62ENSG00000196670.9508.17870657.43110-0.371502.982801.60760K562DDX6
ZFP62ENSG00000196670.91094.014201384.32390-0.339604.040102.95460K562DKC1
ZFP62ENSG00000196670.9493.63950756.53100-0.615905.304804.01710K562EFTUD2
ZFP62ENSG00000196670.9488.79330803.63420-0.717309.711608.21830K562EIF3G
ZFP62ENSG00000196670.9691.602701009.14480-0.545105.144203.96400K562FIP1L1
ZFP62ENSG00000196670.9641.45480887.22700-0.468003.683502.69210K562FMR1
ZFP62ENSG00000196670.9728.17920951.06430-0.385203.127301.57960K562G3BP1
ZFP62ENSG00000196670.9904.809901335.62930-0.561806.317905.16910K562GRSF1
ZFP62ENSG00000196670.91254.79080971.462800.369103.368202.17940K562HNRNPA1
ZFP62ENSG00000196670.9692.390701107.92960-0.678203.129501.80820K562HNRNPA2B1
ZFP62ENSG00000196670.9677.57180994.63320-0.553804.089902.73920K562IGF2BP2
ZFP62ENSG00000196670.9690.320601011.74030-0.551505.673203.85720K562IGF2BP3
ZFP62ENSG00000196670.9895.925601365.18800-0.607607.302705.80260K562KIF1C
ZFP62ENSG00000196670.9838.020701045.47760-0.319102.422801.63330K562MAGOH
ZFP62ENSG00000196670.9864.956601306.74820-0.595306.429004.51390K562MAK16
ZFP62ENSG00000196670.91061.525201529.34290-0.526806.427104.93020K562MBNL1
ZFP62ENSG00000196670.91620.129202090.90070-0.368003.150301.94270K562MSI2
ZFP62ENSG00000196670.9898.413901078.79330-0.264002.407801.65200K562MTPAP
ZFP62ENSG00000196670.9648.340301071.95070-0.725405.873904.41500K562NAA15
ZFP62ENSG00000196670.9474.01560676.48660-0.513104.532902.94680K562NCBP2
ZFP62ENSG00000196670.9582.21700832.17250-0.515303.619401.53470K562PABPC4
ZFP62ENSG00000196670.9725.587501021.87720-0.494005.280903.35010K562PCBP1
ZFP62ENSG00000196670.9592.02430930.24490-0.652007.004505.42410K562PCBP2
ZFP62ENSG00000196670.9877.827801145.63750-0.384102.866002.03010K562PPIG
ZFP62ENSG00000196670.9439.56480736.19000-0.744004.866803.87490K562PRPF8
ZFP62ENSG00000196670.9526.435301015.73530-0.9482016.3922014.84150K562PTBP1
ZFP62ENSG00000196670.91665.878202140.28580-0.361503.331502.43760K562PUF60
ZFP62ENSG00000196670.91831.278902230.54720-0.284503.260102.21820K562PUM2
ZFP62ENSG00000196670.9487.118701275.85120-1.3891025.3736023.73440K562PUS1
ZFP62ENSG00000196670.9553.753101242.97340-1.1665027.8695025.89920K562RBM15
ZFP62ENSG00000196670.9562.92860974.05470-0.7911010.090408.33090K562RBM22
ZFP62ENSG00000196670.9496.00100746.74700-0.590303.485701.97290K562RBM25
ZFP62ENSG00000196670.9510.31210749.94480-0.555403.663202.72110K562RPS19
ZFP62ENSG00000196670.9638.68380818.55210-0.358002.634801.80190K562SF3B4
ZFP62ENSG00000196670.9483.351401017.87540-1.074405.944203.91520K562SNRNP200
ZFP62ENSG00000196670.9604.06840995.74150-0.721109.474208.17500K562SRSF1
ZFP62ENSG00000196670.9688.32980940.35920-0.450103.654802.41420K562SRSF5
ZFP62ENSG00000196670.91717.077601324.002200.374903.109701.65770K562SSRP1
ZFP62ENSG00000196670.9711.113101007.79340-0.503003.970703.11540K562TARDBP
ZFP62ENSG00000196670.9732.81360972.12060-0.407703.511302.57180K562TIA1
ZFP62ENSG00000196670.9959.338601305.15270-0.444106.293104.35200K562TROVE2
ZFP62ENSG00000196670.9980.98510787.973800.316002.625901.84320K562U2AF2
ZFP62ENSG00000196670.9862.341701293.39540-0.584802.693301.42520K562UTP18
ZFP62ENSG00000196670.9499.44100768.17090-0.621105.205103.35790K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZFP62 is not available on ENCORE database.





8 RBPs can affect the splicing of ZFP62 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZFP62ENSG00000196670.9chr5-1802789871802790601802746141802784931802882181802882760.685000.003410.05585includedK562SRSF1
SEZFP62ENSG00000196670.9chr5-1802789871802790601802781601802784931802875271802876540.343000.000160.02979includedK562MATR3
SEZFP62ENSG00000196670.9chr5-1802789871802790601802781601802784931802882181802882850.431000.000630.09400includedK562GPKOW
SEZFP62ENSG00000196670.9chr5-180278987180279060180274614180278493180287527180287663-0.143000.000970.05841excludedHepG2FTO
SEZFP62ENSG00000196670.9chr5-1802789871802790601802781601802784931802875271802876540.375000.000010.00402includedK562HNRNPM
SEZFP62ENSG00000196670.9chr5-1802789871802790601802746141802784931802882181802882760.427000.000210.05008includedK562SAFB
SEZFP62ENSG00000196670.9chr5-1802789871802791961802783801802784931802882181802882760.676000.000000.00016includedK562PTBP1
SEZFP62ENSG00000196670.9chr5-1802789871802790601802781601802784931802880731802882850.659000.001800.03111includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZFP62 is not avaliable on ENCORE database.