SLC17A5

General Information

Gene Name       : SLC17A5
Gene ID             : ENSG00000119899.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC17A5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC17A5ENSG00000119899.123.283.303.29ENCSR000AEF
HepG2SLC17A5ENSG00000119899.126.678.957.81ENCSR985KAT
K562SLC17A5ENSG00000119899.122.112.292.20ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC17A5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC17A5 RNA is bound by 5 proteins.  







eCLIP assay for SLC17A5 is not avaliable on ENCORE database.





5 proteins are bound to SLC17A5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr67430358374303641-3'-UTR,intron-Distal4.877435.17229HepG2UPF1
chr67430462474304708-3'-UTR,intron-Distal4.607039.34567HepG2FUBP3
chr67430400074304076-3'-UTR,intron-Distal4.3835410.16433HepG2UPF1
chr67430352274303583-3'-UTR,intron-Distal3.087534.65394HepG2UPF1
chr67436351574363687-5'-UTR,CDS,intron-Distal5.145156.26070K562DDX3X
chr67436356574363689-5'-UTR,CDS,intron-Distal6.1964613.97750HepG2DDX3X
chr67432012374320217-CDS,intron-Distal3.531005.73361K562YBX3
chr67436351374363565-CDS,intron-Distal3.120143.16711HepG2DDX3X
chr67435936074359440-intron-Distal6.008664.99795K562QKI
chr67435935074359460-intron-Distal4.648713.50357HepG2QKI
chr67435712174357210-intron-Distal3.587284.83406HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC17A5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC17A5 is not available on ENCORE database.

  • 70 RBPs can affect the levels of SLC17A5.  








The Knockdown/knockout RNA-Seq assay for SLC17A5 is not available on ENCORE database.





70 RBPs can affect the gene expression of SLC17A5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC17A5ENSG00000119899.11425.81750556.41350-0.385903.228302.57920HepG2ACO1
SLC17A5ENSG00000119899.11329.61360453.38380-0.460002.637801.66270HepG2ADAR
SLC17A5ENSG00000119899.111434.22370956.508500.584304.709604.03860HepG2AKAP1
SLC17A5ENSG00000119899.11522.02070791.42860-0.600404.762703.74410HepG2ASCC1
SLC17A5ENSG00000119899.11816.65500542.774600.589305.164503.30740HepG2ATP5C1
SLC17A5ENSG00000119899.111022.96560756.559800.435105.217404.32440HepG2AUH
SLC17A5ENSG00000119899.11758.87930449.964800.754008.964007.69160HepG2CALR
SLC17A5ENSG00000119899.11878.48380652.365200.429202.312501.42970HepG2CCAR1
SLC17A5ENSG00000119899.11447.05040556.20420-0.315202.396901.77000HepG2CKAP4
SLC17A5ENSG00000119899.111148.88340636.486000.8519016.9933015.67140HepG2CELF1
SLC17A5ENSG00000119899.11370.48480514.56220-0.473904.654903.61000HepG2DDX19B
SLC17A5ENSG00000119899.11577.18460447.138900.368202.141801.53640HepG2DDX21
SLC17A5ENSG00000119899.111614.72980916.258800.8174010.053208.92600HepG2DDX3X
SLC17A5ENSG00000119899.11491.01030342.366000.520102.911601.98760HepG2EIF3D
SLC17A5ENSG00000119899.11279.41420422.24630-0.595704.406503.07680HepG2EIF3G
SLC17A5ENSG00000119899.11469.79880836.17580-0.831807.772006.70380HepG2EIF4A3
SLC17A5ENSG00000119899.11715.44320868.61370-0.279902.313101.75460HepG2ETF1
SLC17A5ENSG00000119899.11263.91590400.03690-0.600103.654201.67640HepG2EXOSC9
SLC17A5ENSG00000119899.11300.34260607.41180-1.016108.832507.55170HepG2FIP1L1
SLC17A5ENSG00000119899.11657.60310843.68010-0.359502.139501.52720HepG2FXR1
SLC17A5ENSG00000119899.11385.30310782.62980-1.0223011.3287010.02530HepG2G3BP1
SLC17A5ENSG00000119899.11604.31270830.87130-0.459303.191002.23310HepG2G3BP2
SLC17A5ENSG00000119899.11308.47350431.40440-0.483902.411401.80980HepG2GPKOW
SLC17A5ENSG00000119899.11315.21070508.73690-0.690603.928402.60220HepG2GRSF1
SLC17A5ENSG00000119899.11558.52770411.698300.439902.472301.87240HepG2HNRNPLL
SLC17A5ENSG00000119899.11479.17240800.16550-0.739805.476804.01970HepG2KHSRP
SLC17A5ENSG00000119899.11287.57380848.69610-1.5613022.3331020.67880HepG2MATR3
SLC17A5ENSG00000119899.11790.14550491.556000.684707.116205.87720HepG2MSI2
SLC17A5ENSG00000119899.11451.24770706.08260-0.645908.298907.34150HepG2PCBP1
SLC17A5ENSG00000119899.11333.75220454.25390-0.444703.225502.43510HepG2PPIL4
SLC17A5ENSG00000119899.11202.09040415.48370-1.0398012.5228011.05470HepG2PRPF4
SLC17A5ENSG00000119899.11270.89620389.77230-0.524902.529501.75600HepG2PRPF8
SLC17A5ENSG00000119899.11940.41270687.707100.451405.948205.14570HepG2PUM1
SLC17A5ENSG00000119899.11438.80500566.73030-0.369103.057902.41780HepG2PUS1
SLC17A5ENSG00000119899.11409.37220778.09520-0.9265013.5525012.32030HepG2QKI
SLC17A5ENSG00000119899.11523.23230799.58850-0.611807.399006.58930HepG2NELFE
SLC17A5ENSG00000119899.11546.93610744.73760-0.445404.326503.57870HepG2RECQL
SLC17A5ENSG00000119899.11482.77930620.33430-0.361702.119501.51180HepG2RPLP0
SLC17A5ENSG00000119899.11216.67010333.13840-0.620603.790703.08150HepG2RPS19
SLC17A5ENSG00000119899.11348.34400551.76540-0.663504.041803.07380HepG2RPS3A
SLC17A5ENSG00000119899.11543.87780385.569200.496202.770301.98320HepG2RRP9
SLC17A5ENSG00000119899.11769.20300522.502400.557803.388402.31590HepG2SMNDC1
SLC17A5ENSG00000119899.11283.00980453.40970-0.680003.251502.40220HepG2SNRNP70
SLC17A5ENSG00000119899.111050.13170820.001700.356804.131603.55540HepG2SRFBP1
SLC17A5ENSG00000119899.11365.09050727.47140-0.9946019.2662017.86190HepG2SUCLG1
SLC17A5ENSG00000119899.11563.81030410.116300.459103.328402.30280HepG2SUPT6H
SLC17A5ENSG00000119899.11654.03130401.311400.704506.304405.26960HepG2TARDBP
SLC17A5ENSG00000119899.11215.29800494.93960-1.2009015.8681014.84820HepG2TIAL1
SLC17A5ENSG00000119899.11311.79050495.09640-0.667104.202803.31590HepG2XRN2
SLC17A5ENSG00000119899.11279.86080410.01590-0.551004.510803.68650HepG2ZC3H8
SLC17A5ENSG00000119899.11757.70110592.012600.355903.717303.10830HepG2ZNF622
SLC17A5ENSG00000119899.11237.64680390.49480-0.716505.907405.12720K562AGGF1
SLC17A5ENSG00000119899.11261.23620131.967900.985105.818004.53930K562BOP1
SLC17A5ENSG00000119899.11315.97260207.897800.603802.312901.35820K562CNOT7
SLC17A5ENSG00000119899.11186.17860114.136200.705803.142202.00740K562CSTF2
SLC17A5ENSG00000119899.11423.89240281.401800.591004.374603.02260K562DDX3X
SLC17A5ENSG00000119899.1199.40010186.98040-0.911605.014803.95760K562EIF3G
SLC17A5ENSG00000119899.11312.73500400.41870-0.356602.228301.38140K562EIF4G2
SLC17A5ENSG00000119899.11238.86030142.771300.742402.419501.61740K562FMR1
SLC17A5ENSG00000119899.11280.42690165.300200.762404.937303.09220K562FUS
SLC17A5ENSG00000119899.11174.19830305.75080-0.811606.056905.21340K562FXR1
SLC17A5ENSG00000119899.11372.52980268.590000.471902.075301.47480K562G3BP2
SLC17A5ENSG00000119899.11280.21900133.972301.064507.523406.21190K562GPKOW
SLC17A5ENSG00000119899.11131.65820248.51740-0.916505.658904.57360K562GRSF1
SLC17A5ENSG00000119899.11186.26730114.393900.703302.399001.53750K562KRR1
SLC17A5ENSG00000119899.11167.52360324.93140-0.955808.181406.49150K562MATR3
SLC17A5ENSG00000119899.11148.03370217.34220-0.554002.617601.83010K562MTPAP
SLC17A5ENSG00000119899.11401.97490293.569700.453302.762201.53450K562NCBP2
SLC17A5ENSG00000119899.11209.67640289.70130-0.466402.170501.30840K562PCBP2
SLC17A5ENSG00000119899.1191.98790141.96800-0.626002.276501.54980K562POLR2G
SLC17A5ENSG00000119899.11225.15080303.36190-0.430102.058101.33790K562RBM22
SLC17A5ENSG00000119899.11216.09870319.22590-0.562903.099401.93590K562NELFE
SLC17A5ENSG00000119899.11223.36920310.07550-0.473202.381601.71770K562SRSF1
SLC17A5ENSG00000119899.11316.81060197.395600.682403.957102.41360K562STAU1
SLC17A5ENSG00000119899.11196.79850123.191000.675702.567801.59270K562SUPV3L1
SLC17A5ENSG00000119899.11196.78790130.404000.593602.209701.30750K562UCHL5
SLC17A5ENSG00000119899.11427.93510256.074500.740707.204006.10840K562UPF1
SLC17A5ENSG00000119899.11419.35870212.807600.978503.936301.84040K562XPO5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC17A5 is not available on ENCORE database.





1 RBPs can affect the splicing of SLC17A5 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESLC17A5ENSG00000119899.11chr6-743201227432027074310073743101647432503774325170-0.154000.000370.01140excludedHepG2SRSF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SLC17A5 is not avaliable on ENCORE database.