RNF167

General Information

Gene Name       : RNF167
Gene ID             : ENSG00000108523.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RNF167)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RNF167ENSG00000108523.1583.5299.7391.62ENCSR000AEF
HepG2RNF167ENSG00000108523.1553.6064.5959.09ENCSR985KAT
K562RNF167ENSG00000108523.1586.5396.3791.45ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RNF167 is not avaliable on ENCORE database.



Proteins bound to RNA

  • RNF167 RNA is bound by 13 proteins.  







eCLIP assay for RNF167 is not avaliable on ENCORE database.





13 proteins are bound to RNF167 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1748482084848379+3'-UTR,CDS3.8252510.11126HepG2LARP4
chr1748483594848447+3'-UTR4.460448.47057HepG2PCBP2
chr1748482174848359+3'-UTR,CDS5.0119936.07469HepG2PCBP2
chr1748482144848359+3'-UTR,CDS3.985603.06617K562HNRNPK
chr1748483634848428+3'-UTR4.282347.26403K562IGF2BP2
chr1748478624847928+3'-UTR,CDS,intron-Distal,intron-Proximal3.793565.24452HepG2PPIG
chr1748482504848293+3'-UTR,CDS4.172927.37833K562PABPC4
chr1748482494848325+3'-UTR,CDS3.225334.99373K562PCBP1
chr1748478944847982+3'-UTR,CDS,intron-Distal,intron-Proximal4.3439110.85246HepG2PRPF8
chr1748442104844289+5'-UTR,CDS,intron-Distal,intron-Proximal4.4281819.61701HepG2DDX3X
chr1748438104843871+5'-UTR,intron-Distal3.634623.01531K562YBX3
chr1748440434844134+5'-UTR,intron-Distal,intron-Proximal4.295687.41870HepG2DDX3X
chr1748439214844015+5'-UTR,intron-Distal,intron-Proximal3.298823.72682HepG2EIF3D
chr1748439874844121+5'-UTR,intron-Distal,intron-Proximal4.320363.24327K562EIF3G
chr1748465544846615+CDS,intron-Distal,intron-Proximal3.894085.43815HepG2PRPF8
chr1748463994846508+CDS,intron-Distal,intron-Proximal3.013153.33947HepG2U2AF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RNF167 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RNF167 is not available on ENCORE database.

  • 69 RBPs can affect the levels of RNF167.  








The Knockdown/knockout RNA-Seq assay for RNF167 is not available on ENCORE database.





69 RBPs can affect the gene expression of RNF167 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RNF167ENSG00000108523.111096.82920809.343100.438402.277101.43120HepG2BCCIP
RNF167ENSG00000108523.112016.279201241.879900.6991010.154509.10240HepG2BOP1
RNF167ENSG00000108523.111780.024401305.050600.447703.225602.53650HepG2EIF4A3
RNF167ENSG00000108523.11983.043201270.99570-0.370601.878101.30350HepG2EIF4B
RNF167ENSG00000108523.11846.002701373.77430-0.6994013.3493011.78640HepG2EIF4G1
RNF167ENSG00000108523.111698.052801315.956200.367703.262802.38270HepG2EIF4G2
RNF167ENSG00000108523.112043.787501464.100000.481108.622307.66160HepG2ETF1
RNF167ENSG00000108523.112001.884801292.330500.631306.408605.46260HepG2GPKOW
RNF167ENSG00000108523.111273.56700978.124300.380703.214302.52430HepG2HNRNPA1
RNF167ENSG00000108523.111690.643301233.299700.454903.451902.75770HepG2HNRNPLL
RNF167ENSG00000108523.11632.26110828.38650-0.389803.042201.85050HepG2LARP7
RNF167ENSG00000108523.111698.659101344.140700.337602.709101.90790HepG2MSI2
RNF167ENSG00000108523.11733.191701093.59550-0.576805.620204.57340HepG2NSUN2
RNF167ENSG00000108523.11805.280301205.11330-0.581609.699508.67440HepG2PCBP1
RNF167ENSG00000108523.11700.666101259.31430-0.8458019.0790017.36770HepG2PRPF4
RNF167ENSG00000108523.111228.171601062.422700.209101.950801.41430HepG2PUS1
RNF167ENSG00000108523.11911.572801328.01920-0.542807.255906.31560HepG2QKI
RNF167ENSG00000108523.111266.20550561.065301.174203.908301.72530HepG2RBM17
RNF167ENSG00000108523.111490.613701223.721400.284502.972902.44130HepG2RBM22
RNF167ENSG00000108523.11876.315201205.29160-0.459904.591103.74050HepG2RBM25
RNF167ENSG00000108523.11763.76880998.91780-0.387202.899701.88250HepG2RBM27
RNF167ENSG00000108523.11951.051001364.70620-0.521007.956307.12290HepG2NELFE
RNF167ENSG00000108523.11907.696201271.09230-0.485807.040006.12330HepG2RECQL
RNF167ENSG00000108523.111948.122101465.820200.410303.650002.88330HepG2RPLP0
RNF167ENSG00000108523.11617.76350950.39200-0.621503.785902.68090HepG2RPS10
RNF167ENSG00000108523.111003.56520706.123300.507004.900204.10870HepG2RPS19
RNF167ENSG00000108523.11936.82020708.551600.402802.637801.72080HepG2SERBP1
RNF167ENSG00000108523.111157.38200542.320601.093503.573701.99000HepG2SF1
RNF167ENSG00000108523.111982.047501447.987600.452803.112902.39760HepG2SF3A3
RNF167ENSG00000108523.111063.32400525.961101.015502.902601.41180HepG2SFPQ
RNF167ENSG00000108523.111199.23560484.324301.308005.355703.37160HepG2SNRNP200
RNF167ENSG00000108523.11881.881001382.15650-0.6483013.5310012.64550HepG2SRFBP1
RNF167ENSG00000108523.111138.780801332.57800-0.226702.012001.59080HepG2SRSF1
RNF167ENSG00000108523.11911.304001301.39350-0.514107.698806.72380HepG2SRSF5
RNF167ENSG00000108523.11902.129701084.14570-0.265202.582002.04520HepG2SRSF9
RNF167ENSG00000108523.111525.065201200.053400.345704.822704.18210HepG2SSB
RNF167ENSG00000108523.11551.073301121.43960-1.0250016.9328014.78660HepG2SUPT6H
RNF167ENSG00000108523.111268.60740792.134900.679305.463704.56400HepG2SUPV3L1
RNF167ENSG00000108523.11782.665901197.84570-0.614009.373908.43990HepG2TAF15
RNF167ENSG00000108523.11853.206201100.58000-0.367303.252902.35090HepG2TIA1
RNF167ENSG00000108523.11640.67300971.44490-0.600503.717002.02310HepG2TRA2A
RNF167ENSG00000108523.111089.48620563.847300.950202.878901.87090HepG2U2AF2
RNF167ENSG00000108523.11643.22540951.39160-0.564703.374701.96510HepG2XRCC5
RNF167ENSG00000108523.111609.972801242.791300.373406.095005.15960HepG2ZC3H8
RNF167ENSG00000108523.111802.483901412.312700.351806.367305.62670HepG2ZNF622
RNF167ENSG00000108523.11706.33610966.61640-0.452602.565401.32150HepG2ZRANB2
RNF167ENSG00000108523.111587.892801210.613200.391305.505904.74870K562AGGF1
RNF167ENSG00000108523.111780.149801260.578500.497805.191904.43160K562AQR
RNF167ENSG00000108523.111628.301401355.584800.264402.612501.76550K562DKC1
RNF167ENSG00000108523.11819.53590631.961700.374902.593301.79870K562EIF4A3
RNF167ENSG00000108523.11594.80770852.49160-0.519303.505902.21710K562FKBP4
RNF167ENSG00000108523.11881.44010657.208800.423404.222803.49810K562FXR1
RNF167ENSG00000108523.11297.92440533.39290-0.840306.116504.97650K562G3BP2
RNF167ENSG00000108523.111406.22310982.405900.517306.048505.19980K562HNRNPC
RNF167ENSG00000108523.111829.805401129.530200.695907.692806.01570K562HNRNPM
RNF167ENSG00000108523.11939.77340708.591900.407303.530902.47480K562MATR3
RNF167ENSG00000108523.111825.418901497.640300.285402.301401.48500K562MBNL1
RNF167ENSG00000108523.11342.82440829.92340-1.275509.104805.58530K562NFX1
RNF167ENSG00000108523.111211.485001503.77990-0.311804.701803.76320K562NSUN2
RNF167ENSG00000108523.111309.67650959.042200.449404.600902.70640K562PHF6
RNF167ENSG00000108523.112070.566001558.929900.409403.875302.88020K562PPIG
RNF167ENSG00000108523.111266.90120880.796900.524305.255103.95520K562PSIP1
RNF167ENSG00000108523.111919.082601249.345500.619102.998502.43760K562PUS1
RNF167ENSG00000108523.111760.466701217.230900.532308.261507.26510K562RBM15
RNF167ENSG00000108523.111198.91130803.454500.577307.039305.45430K562RCC2
RNF167ENSG00000108523.111660.131101173.106400.500905.838004.27080K562SAFB
RNF167ENSG00000108523.11979.34760761.669800.362602.738501.72130K562SRFBP1
RNF167ENSG00000108523.111270.636901520.33000-0.258803.052102.07410K562SRPK2
RNF167ENSG00000108523.11888.56630676.412300.393503.154102.40370K562SRSF1
RNF167ENSG00000108523.111631.979001320.472000.305502.901502.05980K562SYNCRIP
RNF167ENSG00000108523.111112.46730847.198500.392902.737901.80680K562TIAL1
RNF167ENSG00000108523.111195.92310899.862000.410203.491202.40550K562TRIM56
RNF167ENSG00000108523.111355.764901594.49430-0.234002.492601.80870K562UPF1
RNF167ENSG00000108523.111120.263401418.81840-0.340904.709703.63030K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RNF167 is not available on ENCORE database.





21 RBPs can affect the splicing of RNF167 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERNF167ENSG00000108523.11chr17+484672048468144846145484623648478524847933-0.092000.001230.02440excludedHepG2U2AF1
SERNF167ENSG00000108523.11chr17+484416748442884843377484352548443714844452-0.148000.008180.06922excludedK562AQR
SERNF167ENSG00000108523.11chr17+484653848465794846145484623648467204846814-0.090000.007760.06642excludedK562AQR
SERNF167ENSG00000108523.11chr17+484614548462364845871484595948478524847896-0.139000.000410.04264excludedHepG2SRSF7
SERNF167ENSG00000108523.11chr17+484614548462364845871484595948478524847896-0.098000.002460.08207excludedHepG2MATR3
SERNF167ENSG00000108523.11chr17+484647348465794846145484623648478524847933-0.123000.002210.05649excludedHepG2SF3A3
SERNF167ENSG00000108523.11chr17+484614548462364845871484595948478524847896-0.171000.001190.07284excludedK562HNRNPUL1
SERNF167ENSG00000108523.11chr17+484614548462364845871484595948478524847896-0.202000.000000.00032excludedHepG2PCBP1
SERNF167ENSG00000108523.11chr17+484614548462364845871484595948478524847896-0.107000.001880.07500excludedHepG2SF3B4
SERNF167ENSG00000108523.11chr17+484672048468144846145484623648478524847933-0.106000.007310.09682excludedK562U2AF2
SERNF167ENSG00000108523.11chr17+484672048468144846156484623648478524847933-0.063000.004280.06153excludedK562HNRNPC
RIRNF167ENSG00000108523.11chr17+484378148442884843781484402148441674844288-0.083000.010160.08695excludedHepG2QKI
RIRNF167ENSG00000108523.11chr17+4843781484428848437814844021484416748442880.067000.000870.04819includedHepG2HNRNPA1
RIRNF167ENSG00000108523.11chr17+484378148442884843781484402148442174844288-0.229000.000060.00505excludedK562SUPV3L1
RIRNF167ENSG00000108523.11chr17+4847855484809548478554847933484800948480950.072000.000180.00527includedHepG2SRSF9
RIRNF167ENSG00000108523.11chr17+4847855484809548478554847933484800948480950.083000.002980.03500includedK562UTP18
RIRNF167ENSG00000108523.11chr17+484378148442884843781484402148441674844288-0.103000.000010.00505excludedHepG2SRSF7
MXERNF167ENSG00000108523.11chr17+484614548462364847852484793348458714845959484800948485170.097000.012960.078151includedK562AQR
MXERNF167ENSG00000108523.11chr17+48461454846236484785548479334845871484595948480094848517-0.162000.000250.017942includedHepG2BCCIP
MXERNF167ENSG00000108523.11chr17+48461454846236484785248479334845871484595948480094848517-0.139000.000390.024482includedHepG2BCCIP
MXERNF167ENSG00000108523.11chr17+48461454846236484785248479334845871484595948480094848517-0.121000.004310.043332includedHepG2SFPQ
MXERNF167ENSG00000108523.11chr17+48461454846236484785248479334845871484595948480094848517-0.122000.002280.054232includedK562SBDS
MXERNF167ENSG00000108523.11chr17+48461454846236484785248479334845871484595948480094848517-0.161000.000040.003162includedK562PPIL4
MXERNF167ENSG00000108523.11chr17+48461454846236484785248479334845871484595948480094848517-0.124000.004650.096682includedK562DHX30
MXERNF167ENSG00000108523.11chr17+48461454846236484785248479334845871484595948480094848517-0.150000.000020.009142includedK562NPM1
MXERNF167ENSG00000108523.11chr17+48461454846236484785248479334845871484595948480094848517-0.111000.001850.034752includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RNF167 is not avaliable on ENCORE database.